Herbaspirillum frisingense: G5S34_19440
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Entry
G5S34_19440 CDS
T06761
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hfr
Herbaspirillum frisingense
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hfr03016
]
G5S34_19440 (truB)
Enzymes [BR:
hfr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
G5S34_19440 (truB)
Transfer RNA biogenesis [BR:
hfr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
G5S34_19440 (truB)
Prokaryotic type
G5S34_19440 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QNB08708
LinkDB
All DBs
Position
complement(4279057..4280073)
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AA seq
338 aa
AA seq
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MADNMTADPASASPDSAPEQGKRSKRGQPQRPPRPPRVPVHGVLLLDKPVGLSSNDALIR
AKRMLNAPKAGHTGTLDPFATGLLPLCFGEATKFSQDLLEADKTYEALVHLGVRTDTGDT
EGQVIGERPVAVSVAQIEAALAQFRGPIRQVPPMHSALKRDGKPLYEYARAGITLEREAR
DVTIHALQLLDYQSPMLRIRVTCSKGTYIRVLGEDIGEVLGCGAHLNALRRIGVGPLTLE
GAVTLEQFDAPGDVDSRKAMLLPVDGLLRSFPAVQLTDELARRFLHGQRLPLGKEGVPVP
EQTGRVRVYRSSDGALLGTGLLQEYAILAPERLVSTAS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaatatgacggcggaccccgcgtccgcttcccccgatagtgcgccggagcag
ggcaagcgcagcaagcgcggccagccgcaacggccgccgcgtcctccgcgcgtaccggtg
catggtgtgttgctgctggacaagccggtgggcctgtcctccaacgacgccctgatccgc
gccaagcgcatgctcaacgcgcccaaggccggccataccggcaccctggacccgtttgcc
accggcttgctgccgctgtgcttcggcgaagccaccaagttctcgcaggacctgctggaa
gccgacaagacctacgaggcgctcgtgcacctgggtgtgcgcaccgataccggcgacacc
gagggccaggtcatcggtgagcggccggtggcggtcagcgtggcgcagatcgaggccgcc
ctggcgcagttccgcggcccgatccgccaggttcctcccatgcactcggccttgaagcgc
gatggcaagcctttgtatgaatacgcccgcgccggcatcacgctggaacgtgaggcgcgc
gacgtgaccatccatgcgctgcagttgctggattaccagtcgccgatgttgcgtatccgc
gtcacctgcagcaaagggacctatatccgcgtgctgggtgaagatatcggcgaggtcctg
ggctgcggcgcgcacctgaacgccctgcgccgcatcggtgtcggcccgctgacgctggag
ggtgcggtcacgctggaacagttcgacgcccccggtgacgtcgactcccgcaaggccatg
ctgttgcccgtcgatggcctgctgcgcagcttcccggcagtgcaactgacggatgagctg
gcgcgccgcttcctgcacggccagcgcctgccgctgggcaaggagggtgtgcccgtaccg
gagcagaccggccgggtgcgcgtctatcgcagttcggatggcgccttgctgggcaccggg
ctgttgcaggaatacgccatcctggcgccggaacggctggtgtccacggcctcctag
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