Herbaspirillum frisingense: G5S34_19465
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Entry
G5S34_19465 CDS
T06761
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
hfr
Herbaspirillum frisingense
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hfr03009
]
G5S34_19465
Enzymes [BR:
hfr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
G5S34_19465
Ribosome biogenesis [BR:
hfr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
G5S34_19465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QNB08713
UniProt:
A0A7G6B0C9
LinkDB
All DBs
Position
complement(4286039..4288129)
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AA seq
696 aa
AA seq
DB search
MKPTSSKDETQVELAAAAAATTDKPVKKRTRKPAASAASEASEVPAAQAVAADAAAPKKR
APRAKKAVAGESAPVEQASAQVAAAPAQEPAEPVKKPRATKPRAKKADQAIESAASAASA
QLSLEIESAPAPAKPKRAAKPKAAAQAEAAPAAAAPAPAPVEPPKVIVTVGEEVVAPPVL
LDAPLDPNRAKPARRGVRGPRALRNNRAAQRAAAGAETGAPAKGESPSAPEQPRGQFGKN
NGHGGQSGHNGQPGQQGQQGKKNFDKNGKKPKAPQLGLRATEPVDDIFSYVTSEAYDRDE
GAKAGGRQAHQMRGKNGRRDLTAEDDAPKLHKVLADAGLGSRRDMEELIVAGRVSVNGEP
AHIGQRILPTDAVRINGKLIQRKVSKRPPRVLVYHKPSGEIVSHADPEGRSSVFDRLPTM
KAGKWLAVGRLDFNTEGLLLFTTSGDLANRLMHPRYNIEREYAVRTLGELEEGMRQKLLS
GVELDDGPAQFSRIADGGGEGVNKWYRVTIGEGRNREVRRMFEAVGLTVSRLIRTRYGAM
TLPQTLKRGRWEELEENAVRNLMAACGLEKQAGEAKSGNGGKPQGNAPRGNAMQNKGPQK
GRSSGNFGNQGGNYGGQGGNAGGGNYGGGNYGGNKGGNKGGQPKSRQPDPLQTALGFPDA
GNGQRRGNRPQRGGGNSAANYMLGGLPGMNRRRGGR
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaactagttccaaagacgagacccaggtcgaactcgcagcggctgctgccgcc
accaccgacaagccggtgaagaagcgcacccgcaagcctgcggccagcgccgcatccgag
gcaagcgaggtgccggcggcgcaagccgtggctgccgatgctgccgcgccgaagaagcgt
gctccccgagccaagaaggcagtggccggggaatcggccccggtggagcaagcttccgcc
caggttgcagctgcccctgcacaagagcctgccgagccggtcaagaagccacgcgccacc
aagccgcgcgccaagaaggccgatcaggccatcgagagcgccgcctcggccgcttcggcc
cagttgagcctggagatcgaatccgcgcccgcgccggccaagcccaagcgcgccgccaag
cccaaggcggctgcccaggcggaagcggctccggctgctgcggcaccggcaccggcgcct
gtcgagccgcccaaggtcatcgtcaccgtgggtgaggaagtggtggcgccgccggtgctg
ctggacgccccgttggatccgaaccgtgccaagcctgcccgtcgcggtgtgcgcggcccc
cgcgccctgcgcaacaaccgcgctgcccagcgcgctgctgccggcgccgaaacaggtgct
ccggccaagggcgagagtccgtcggcaccggaacagccgcgcggccagttcggcaagaac
aacggccacggtggtcaaagtggtcataatggccagcctggccagcaaggtcagcaaggc
aagaagaacttcgacaagaacggcaagaagcccaaggccccgcaactggggctgcgcgcg
acggagccggtggacgacatcttctcctacgtcacctcggaagcctacgaccgtgacgaa
ggcgccaaggccggtggtcgccaggcacatcagatgcgcggcaagaacggtcgccgcgac
ctgaccgccgaggatgatgctcccaagctgcacaaggtgctggccgacgcaggtctgggg
tcgcgccgcgacatggaagagctgatcgtcgccggccgtgtctcggtcaatggcgagccg
gcccacatcggccagcgcatcctgcccaccgatgccgtgcgcatcaatggcaagctgatc
caacgcaaggtgagcaagcgtccgccgcgcgtgctggtgtaccacaagccctccggtgaa
atcgtcagccatgccgatccggaaggacgcagttccgtattcgaccgtctgccgaccatg
aaggccggcaaatggctggccgtggggcgcctggacttcaacaccgaaggcctgctgctg
ttcaccacttccggtgacctggccaaccgcctgatgcacccgcgctacaacatcgagcgt
gaatacgccgtgcgtaccctgggcgagctggaagagggcatgcgccagaagctgttgagc
ggcgtcgaactcgatgatggtccggcgcagttctcgcgcatcgccgacggcggtggcgaa
ggcgtcaacaagtggtatcgcgtcaccatcggcgaaggacgcaaccgcgaagtgcgccgc
atgttcgaggcggtgggcctgaccgtgtcgcgcctgatccgtacccgctatggcgccatg
acgctgccgcagaccttgaagcgcggtcgctgggaagagctggaagaaaacgccgtgcgc
aacctgatggcggcctgcggtctggaaaaacaggctggcgaggccaagtcgggcaatggc
ggcaagccgcagggcaacgcgcctcgcggcaatgcgatgcagaacaaggggccgcagaag
ggccgcagcagcggcaacttcggcaaccagggcggcaattacggcggccagggtggcaat
gccgggggcggcaactacggcggcggcaattacggtggtaacaagggcggcaacaagggt
ggccaacccaagagtcgccagcctgacccgctgcagaccgcattgggcttccccgacgcc
ggcaacggccagcgccgcggcaatcgcccgcaacggggtggcggcaacagcgcggccaac
tacatgctgggcggcctgccgggcatgaatcgccgtcgcggcggtcgctga
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