Herbaspirillum frisingense: G5S34_19935
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Entry
G5S34_19935 CDS
T06761
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr03030
DNA replication
hfr03430
Mismatch repair
hfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G5S34_19935
03430 Mismatch repair
G5S34_19935
03440 Homologous recombination
G5S34_19935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hfr03032
]
G5S34_19935
03400 DNA repair and recombination proteins [BR:
hfr03400
]
G5S34_19935
Enzymes [BR:
hfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G5S34_19935
DNA replication proteins [BR:
hfr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G5S34_19935
DNA repair and recombination proteins [BR:
hfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G5S34_19935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_16
AAA_14
AAA_18
PIF1
AAA_2
AAA_30
nSTAND3
Glyco_tranf_2_5
TsaE
AAA_19
AAA_28
Herpes_Helicase
AAA_assoc_2
Rad17
AAA_24
Motif
Other DBs
NCBI-ProteinID:
QNB08798
LinkDB
All DBs
Position
complement(4386754..4388892)
Genome browser
AA seq
712 aa
AA seq
DB search
MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK
SLNCVGPDGNGGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP
SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKFILATTDPQKIPVTVLSRCLQFNL
KQMPPGHIISHLDNILNQEGIAFDPPALRLLAQGASGSMRDALSLTDQAIAYAAGRVTLE
AVQGMLGALDQSYLIRVLDALAVQDGAALLGVADDMATRSLSYNAALQDLGTLLHQIALA
QAVPAALAEDLPNREDILRLATQFSPEHVQLFYQIAVHGRNELGLAPDEYAGFSMTLLRM
LAFRPVSATGSGPVLGAAAPTAARPAAPRQAAPLMAPQAAVTSAPVARVQAPAAAPAPTV
PTAPIAPAAANASAAPATASAASATRAAPAAPASAREAALMAARVGKNGKAPAARPTPAP
TPASAPAEVAAQAASAPAASVPRAAAPLASDVPDMPEPPPFDAIPPWEEDARGDTMPPAG
FAAEKKTEPAVAVAPAAPAAPAAPQRPAATPAQQQETARIAAELGWDGHWPSLAASLALR
GVAHQMAFQSELVRCEALNGGNVCFHLRIPLDTLRSSGSVEKLVAALSERFGKEIRVETE
LGAVADTANAVAEAERAERQRKAEQKMTSDPFVMTMMREFGATIVPGSIQAL
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcaagttctcgcccgtaaatatcgtccccgcagcttcgacaccctggtaggc
caggaacacgtcgtgcgcgcgctgacgcacgcgctggaacagcagcggctgcaccacgcc
tacctgttcaccgggacccgtggcgtaggcaagaccacgctctcgcgcatcctggccaag
tcgctcaattgcgtcggcccggatggcaacggcggcatcaccgcggctccctgtggcgtg
tgcgaagcctgcgtggccatcgatgccggtcgcttcgtcgactacatcgagatggacgcc
gcctccaaccgcggtgtggacgagatggcgcagttgctggaacaggccatctacgcgccg
tccaacgcccgcttcaaggtctacatgatcgacgaagtgcacatgctcaccaaccacgcc
ttcaacgccatgctgaagacgctggaagagccgcccgagcacatcaagttcatcctcgcc
accacagatccacaaaagattcccgtgaccgtgctgtcgcgctgcctgcagttcaacctg
aagcagatgccgcccggccacatcatcagccatctcgacaacatcctgaaccaggaaggc
atcgcgttcgatccccccgcgctgcgcctgctggcgcaaggggcgtcgggctccatgcgc
gatgcgctgtcgctgaccgaccaggccatcgcctatgccgccggccgggtcaccctggaa
gccgtgcagggcatgctgggcgcgctggaccagtcctacctgatccgcgtcctcgacgcc
ctggccgtgcaggatggcgccgccctgctgggtgtggccgacgacatggcgacccgcagc
ctgtcctacaatgctgcgctgcaagacctggggacgctgctgcaccagatcgcgctggcg
caggccgtaccggctgcactggccgaggacctgcccaaccgcgaagatatcctgcgcctg
gcgacccagttcagtcccgagcacgtgcagctgttctaccagatcgccgtgcacggccgc
aatgaactgggcctggccccggacgaatacgccggcttcagcatgacgctcttgcgcatg
ctggctttccgcccggtcagtgccactggctccggcccggtgcttggcgctgcagcaccg
actgcggctcgcccggccgcaccgcgccaggcggccccgctgatggcgccgcaagcggcc
gtgaccagcgccccggtcgcccgcgtgcaggccccggcagcagcaccagcgccgaccgtg
ccgactgcaccgattgcgccggccgcagcaaacgcatccgcagcacctgcaacagcttca
gccgcatctgctacgcgtgccgcccctgcagccccggcatcggcccgcgaggcagcgctg
atggcagcccgcgtcggcaagaacggcaaggctcccgctgctcgtccgacacccgcgccg
acaccggcgtcggcgcctgcagaggtcgctgcgcaggcggcttccgccccggctgcttcg
gttccccgtgccgccgcgccgcttgcgtcggacgtgccggacatgcccgaaccaccgccc
ttcgacgccattccgccctgggaagaggatgcacgcggcgacacgatgccgcccgctggc
ttcgcggctgaaaaaaaaactgagcccgctgtcgccgtcgcaccggctgcaccggccgcg
cccgccgcaccccagcgcccggctgccacacccgcacagcagcaggaaaccgcccgcatc
gccgctgaactgggctgggacggccattggcccagcctggccgccagcctggcactgcgc
ggcgtggcccatcagatggcgttccagagtgaactggtgcgctgcgaagcgctcaatggc
ggcaatgtctgcttccatctgcgcattcccctcgataccctgcgttcctcgggtagcgtg
gaaaaactggtggccgccctgtcagaacgcttcggcaaggaaatccgcgtggagaccgaa
ctcggcgccgtcgccgacacggccaacgcagtggccgaagccgagcgcgccgagcgccag
cgcaaggccgaacagaagatgaccagcgaccccttcgtgatgaccatgatgcgcgaattc
ggcgccaccatcgtgccggggtcgatccaggcgttgtga
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