Herbaspirillum frisingense: G5S34_20005
Help
Entry
G5S34_20005 CDS
T06761
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hfr
Herbaspirillum frisingense
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hfr03032
]
G5S34_20005 (gyrA)
03400 DNA repair and recombination proteins [BR:
hfr03400
]
G5S34_20005 (gyrA)
Enzymes [BR:
hfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
G5S34_20005 (gyrA)
DNA replication proteins [BR:
hfr03032
]
Prokaryotic type
DNA Topoisomerases
G5S34_20005 (gyrA)
DNA repair and recombination proteins [BR:
hfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G5S34_20005 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QNB08812
LinkDB
All DBs
Position
complement(4402644..4405289)
Genome browser
AA seq
881 aa
AA seq
DB search
MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHEMNNVWN
RPFVKCARVVGEVMGKYHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDGAAAM
RYTECRLDKISNELLADIEKETVDFVPNYDGKEKEPSVLPTRIPNLLVNGSSGIAVGMAT
NIPPHNITEVINGALHLLANEHCTIDELIELVPAPDFPTGGIIYGVSGVRDGYRTGRGRV
VMRAKTHFEEYGREGRIAIIVDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSG
MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQLLECFLSHRRE
VVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIAKAELMSRAWDSSMV
REMLARAGEANEGGIEAFRPESLPAHYGIQSDGMYKLSDDQAQEILQMRLQRLTGLEQDK
IVNEYKEVMAQIADLLDILSKPARVTAIITDELNAARNDYGIGAKDERRSTIEHNATDLA
TEDLITPQDMVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY
ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGANRSFPDDRY
VFMATSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGAHDVMLFSDAGKAVR
FDENDVRPMGRTARGVRGMNLEETQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH
GRGTKGMIAIQTSERNGKVVAATLVDSTDEIMLITTGGVLIRTRVSEIREMGRATQGVTL
IAVEDGTKLSGLQRVVESDVEDVMDGENAEGAGSEAPAAGE
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgctaaagaaaccatccccatttccctcgaagaagagatgcgcaagagt
tacctcgattacgccatgagcgtgatcgtgggtcgggcactgccggacgtgcgcgatggc
ttgaagccggtgcaccgccgcgtgctgtacgcgatgcacgagatgaacaacgtctggaac
cgtccgttcgtgaagtgcgcgcgcgtggtcggtgaagtgatgggcaagtatcacccgcac
ggtgacgcgtccatctatgacaccctggtgcgcatggcccaggacttctcgctgcgctat
accctggtcgacggccagggcaacttcggttccatcgacggcgacggcgctgcggcgatg
cgttacaccgagtgccgcctggacaagatctccaacgaactgctggccgacatcgagaag
gaaaccgtcgatttcgtgcccaactacgacggcaaggaaaaggaaccttcggtcctgccg
acccgtatccccaacctgctggtcaacggctcctccggcatcgccgtgggcatggccacc
aacatcccgccgcacaacatcaccgaggtgatcaacggcgcgctgcacctgctggccaac
gagcattgcaccatcgatgaactgatcgaactggtgccggcaccggacttcccgaccggc
ggcatcatctatggcgtctccggcgtgcgcgacggttatcgtaccggccgcggtcgcgtg
gtcatgcgcgccaagacccacttcgaagagtatggccgcgaaggtcgtatcgccatcatc
gtcgatgagctgccctaccaggtcaacaagaaggccctgctggaacgtatcgccgagctg
gtgcgcgacaagaagctggaaggcatctccgacctgcgcgacgagtccgacaagtcgggc
atgcgcgtggtcattgaattgaagcgcggcgaagtgcccgaggtggtgctcaacaacctc
tacaagcagacccagctgcaggacaccttcggcatgaacatggtggccctggtcgatggc
cagccccgcctgctgaacctgaagcagctgctggaatgcttcctgtcgcaccgtcgcgaa
gtggttacccgtcgtaccgtgttcgaactgcgcaaggcgcgcgaacgcggtcacgtgctg
gaaggtctggccgtggcactggccaacatcgatgacttcattgccatcatccgcgccgca
ccgacgccgccgatcgccaaggccgaactgatgtcgcgcgcctgggattcgtccatggtg
cgcgagatgctggcccgcgccggcgaagccaacgaaggcggcatcgaagccttccgtccg
gaaagcctgccggcccattacggcatccagtccgatggcatgtacaagctctccgacgat
caggcccaggaaatcctgcagatgcgtctgcagcgcctgaccggcctggagcaggacaag
atcgtcaacgaatacaaggaagtcatggcgcagatcgccgacctgctggacatcctgtcc
aagccggcccgcgtgaccgccatcatcaccgacgaactcaacgccgcccggaatgactac
ggcatcggtgccaaggacgagcgtcgctccaccatcgagcacaacgccaccgacctggcc
accgaagacctgatcacaccgcaggacatggtggtgaccctgtcccacaccggctacatg
aagtcgcagccggtctccgagtaccgcgcacagaaacgtggcggtcgcggcaagcaggcc
atggcgaccaaggatgacgactggatcgaccagctcttcatcgccaacacgcacgactac
atcctgtgcttctccaaccgtggccgcttgtactggctgaaggtctgggaagtgccgcaa
ggttcgcgcaactcgcgcggcaagcccatcgtcaacatgttcccgctgcaggatggcgag
aagatcacggtgatcctgccggtgtcgggcgccaaccgcagcttcccggatgaccgctac
gtcttcatggcgaccagcctgggcacggtcaagaagaccccgctgtcggacttctccaac
ccgcgcaaggccggcatcatcgccgtggacctcgatgaaggcgacttcctgatcggtgct
gcgctgaccgacggtgcgcacgacgtgatgctgttctcggatgccggcaaggccgtgcgt
ttcgacgagaacgacgtgcgtccgatgggccgtaccgcccgtggcgtgcgcggcatgaac
ctggaagaaacgcagcaggtcatcgccctgctggtggcagagaacgagcagcagtcggtg
ctcaccgccaccgagaacggcttcggcaagcgtaccccgatcaccgagtacacccgccat
ggccgtggcaccaagggcatgatcgcgatccagaccagcgagcgtaacggtaaggtagtg
gctgcgaccctggtcgattccaccgacgagatcatgctgatcaccaccggtggcgtgctc
attcgcacccgcgtgtcggagatccgcgaaatgggccgtgccacccagggtgtgaccctg
attgcggtggaagacggcaccaagctgtccggcctgcaacgcgtggtcgagtccgatgtg
gaagacgtgatggacggcgagaacgccgagggtgccggcagcgaagctcctgccgctggc
gagtaa
DBGET
integrated database retrieval system
