Herbaspirillum frisingense: G5S34_20465
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Entry
G5S34_20465 CDS
T06761
Name
(GenBank) recombinase RecA
KO
K08482
circadian clock protein KaiC
Organism
hfr
Herbaspirillum frisingense
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
G5S34_20465
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
PAXNEB
NACHT
RecA
Rad51
nSTAND3
AAA_22
AAA_16
DnaB_C
NPHP3_N
AAA_30
AAA_19
MEDS
SLFN-g3_helicase
AAA_18
AAA_33
CbiA
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
QNB08891
LinkDB
All DBs
Position
complement(4517512..4518987)
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AA seq
491 aa
AA seq
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MSDHQQPHPSAPVRSHRPSRIPLISTGIAGFDEILGGGLPAGSLYLIQGLAGSGKTTLAS
QVGFAQARGGSKVMLLTLIAESHAKMLNHVSNFDFFDESLVGEQMQMLSGYGALASEGLR
GLLRLISAELNRHRPAMLIIDGFRSVRDSGPSDLNLSEFMHSLNALVFAMNCTTILLSPV
EGNMPESENTLVDGVIELSQHESGMQLVREIKVFKLRGANHLLGKHVFEINQSGVEIFPR
FEATATRAGKVPGTSDRYVSVGIPSWDKCIGGGVVSGSLTCLLGSPGVGKTLMGLHFIEQ
GLKDGQQCLILGFYESPERLLAKARKAGMPMEQHIESGALQMMWQLPLEMLCDDLAKRML
DNISSRGVTRLLIDGVDGLRSIVVQQQRVRPFLVALTNELRARGVTTFITEQLPYFRESR
PQVDPSSSQLYENMMLLEYVVQHDVSRRQISVMKLRENGYDGASRLMNISDAGIEIDGLV
SPSTAPVADGR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcaccagcagccccatccatccgcccccgtccggagccatcggcccagccgc
atccccctgatcagtacggggattgccgggtttgacgagatcctgggtggcggtctgcca
gcgggtagcctgtatctgatccaggggctggccggcagcggcaagaccacgctggcctcg
caggtgggctttgcccaggcgcgcggcggcagcaaggtgatgctgttgacgctcattgcc
gaatcgcacgccaagatgctcaatcacgtgagcaattttgatttcttcgatgaaagcctg
gtcggcgagcagatgcagatgctcagcggctatggcgcgctggccagcgagggtttgcgc
ggcctgttgcggctgatcagtgccgaactgaatcgtcatcgtccggccatgctgatcatc
gacggcttccgctcggtacgcgattcggggccgtcggacctgaatctctcggaattcatg
cattcgctcaatgccctggtgttcgccatgaattgcaccaccatcctgctttccccggtg
gagggcaacatgcccgagtccgagaacaccctggtggacggtgtcatcgagctgagccag
cacgagtcgggtatgcagctggtgcgcgagatcaaggtgttcaagctgcgcggcgccaat
cacctgctgggcaagcatgtgttcgaaatcaaccagagcggggtcgagatcttccctcgc
ttcgaggccaccgccacccgcgccggcaaggtgccgggcacctccgaccgctatgtcagc
gtgggcatcccttcctgggacaagtgcatcggcggtggcgtggtcagtggttccctgacc
tgcctgctgggcagccccggggtgggcaagaccctgatgggcctgcatttcatcgagcag
ggattgaaggatggccagcagtgcctgatcctgggtttctacgaatcccccgagcgtctg
ctggccaaggcccgcaaggccggcatgcccatggaacagcatatcgagagcggcgccctg
cagatgatgtggcagctgccgctggaaatgctgtgcgacgacctggccaagcgcatgctg
gacaacatctccagccggggcgtgacacgcctgctgatcgatggcgtcgacggcttgcgc
agcatcgtggtgcaacagcagcgcgtgcggcccttcctggtggcgctgaccaacgaactg
cgggcgcggggcgtgaccaccttcatcaccgagcaactgccgtatttccgcgaatcacgg
ccccaggtcgatcccagctcctcgcagctgtatgaaaacatgatgttgctggagtacgtg
gtccagcacgatgtcagccgtcgccagatttcggtgatgaaactgcgcgaaaacggctat
gacggcgccagccggctgatgaacatttcggatgccggcattgagatcgatggcctggtc
tccccctctaccgcgccggttgcggatggacgttga
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