Herbaspirillum frisingense: G5S34_21070
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Entry
G5S34_21070 CDS
T06761
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr00061
Fatty acid biosynthesis
hfr00071
Fatty acid degradation
hfr01100
Metabolic pathways
hfr01212
Fatty acid metabolism
hfr02024
Quorum sensing
hfr04146
Peroxisome
Module
hfr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
G5S34_21070
00071 Fatty acid degradation
G5S34_21070
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
G5S34_21070
09145 Cellular community - prokaryotes
02024 Quorum sensing
G5S34_21070
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hfr01004
]
G5S34_21070
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hfr04147
]
G5S34_21070
Enzymes [BR:
hfr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
G5S34_21070
Lipid biosynthesis proteins [BR:
hfr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
G5S34_21070
Exosome [BR:
hfr04147
]
Exosomal proteins
Exosomal proteins of breast milk
G5S34_21070
Exosomal proteins of breast cancer cells
G5S34_21070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QNB08998
LinkDB
All DBs
Position
complement(4652360..4654060)
Genome browser
AA seq
566 aa
AA seq
DB search
MERFWLASYPAGVPADIDPGRYGSLVQMIDEAFTRHADRNAYVCMGKYLRYSELDAMSRA
LGGWLQGLGLQKGARVAIMMPNVLQYPIAIAAILRAGYTVVNVNPLYTARELEHQLKDSG
AEAIFVLENFACTLQKVVANTSIKHIVVASMGELLGTLKGAIVNLVVRHVKKLVPAWSLP
NAISFSRALSQAQGKQLRPVSLTPDDVAFLQYTGGTTGVAKGAVLTHRNLVANVLQAEEW
LTPALKAGKPIDQLVFVCALPLYHIFALTVCNMLGTREGALNLLIPNPRDIPGFVKELAK
YKVNTFPAVNTLYNALLNNADFAKLDFSGYRCCVGGGMAVQQSVADKWKKLTGCPIIEGY
GLSETSPIASANPCTIEEYTGTIGLPLPSTEIAILDDDGNPVPLGQPGEIAIRGPQVMPG
YWQRPDETAKVMTPDGFFKTGDIGIMDALGYTRIVDRKKDMILVSGFNVYPNEIEGVVAQ
HPGVLECACVGVPDEHTGEAVKLFVVRKDKSLTSEQLMAYCKEQFTGYKKPKYIEFRDEL
PKTNVGKILRRELRDEPAKAQQKRAA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggaaagattctggcttgcatcctatcctgcaggcgttcccgcggacatcgaccccggc
cgttacggctcgttggtacagatgatcgatgaagccttcaccaggcacgccgaccgcaat
gcctacgtctgcatgggcaagtacctgcgttacagcgaactggatgccatgtcgcgcgca
ctgggcggctggctgcagggactggggctgcagaagggcgcccgggtggcgatcatgatg
cccaatgtgctgcagtatccgattgccatcgcggcgatcctgcgggccggttataccgtg
gtcaatgtcaatccgctctataccgcgcgcgagctggaacatcagttgaaggattcgggc
gccgaagccatcttcgtactggaaaactttgcctgcacgctgcagaaggtggtcgccaat
accagcatcaagcatatcgtggtggccagcatgggcgagctgctgggcacgctcaagggt
gccatcgtcaacctggtggtgcgccatgtgaagaagctggtgccggcctggtcgctgccc
aacgccatcagcttcagccgtgccttgtcgcaagcgcagggcaagcagctgcggccggtc
agcctgacgcctgacgacgtcgccttcctgcaatacaccggtggcaccaccggcgtggcc
aagggcgccgtactgacccaccgcaatctggtggccaacgtgctgcaggccgaggaatgg
ctgaccccggcgctcaaggccggcaagcccatcgaccagttggtgttcgtctgtgccttg
ccgctgtatcacatctttgcgctgactgtctgcaacatgcttggcacacgcgaaggtgcg
ctcaacctgctgattcccaacccgcgtgatatccccggcttcgtcaaggagctggccaag
tacaaggtcaataccttcccggccgtcaatacgctctacaacgcactgctcaacaatgcc
gatttcgccaagctcgacttttccggttaccgctgctgcgtgggcggcggtatggccgtg
cagcaaagcgtggccgacaagtggaagaagctgaccggctgccccatcatcgagggctac
ggcctgtcggagacctcgccgattgccagcgccaatccctgcaccatcgaagaatacacc
ggcaccatcggtctgccgttgccttcgaccgagatcgccatcctcgacgacgatgggaat
cctgtgccgctcggccagccgggcgagatcgccatccggggtccgcaagtgatgccgggt
tactggcagcgccccgacgagacggccaaggtcatgacgccggacggtttcttcaagacc
ggcgatatcgggatcatggatgccctgggctacacccgtatcgtcgaccgcaagaaggac
atgatcctggtctccggtttcaacgtctatcccaacgagatcgaaggcgtggtggcgcag
catccgggcgtgctggaatgcgcctgcgtgggcgtgccggacgaacataccggcgaggcg
gtcaagctcttcgtggtgcgcaaggacaagtcgctcaccagcgagcaattgatggcctac
tgcaaggagcagttcaccggctacaagaagcccaagtacatcgagttccgtgatgagctg
cccaagaccaacgtcggcaagatcctgcgtcgcgagttgcgcgatgagccggccaaggca
cagcagaaacgggctgcctga
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