KEGG   Herbaspirillum frisingense: G5S34_21850
Entry
G5S34_21850       CDS       T06761                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
hfr  Herbaspirillum frisingense
Brite
KEGG Orthology (KO) [BR:hfr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hfr02044]
    G5S34_21850 (tssF)
Secretion system [BR:hfr02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   G5S34_21850 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: QNB09131
LinkDB
Position
complement(4830593..4832437)
AA seq 614 aa
MQDLLPYYERELSFLRRYPRDFSERYPKIAGGLLMAGEVCEDPHIERMIQSYALLNARVS
KRLDDDYPELTEALFEVLYPHYLRPFPSCSIARMDHLASADQLTATTEIPRGSLLSSGQV
KGIVCRFRTAYDVSIAPIRLSQVTFAPIIDAPEAVMLQPGISSSLSITFESFADNVPFAS
LGLASLRLFIDGEASFCAALRDSLFMRTEAAWVEASGSGRWIALRQPPLAEVGFAEEDAL
IDFPSQSHPAYRLLTEYFALPEKFNFFDLDLGAVFAVLPSGARRFTVHLGLSGLRADSHV
ARQLGSISNSNILLGCTPVINLFPHAGDPIRLTHAGAYHSVLVDGRNTFGYQVHSINSVQ
LLRQTPQGETITRFRPFYSLRHGQSPEHDGHYWIMRRDELVALKSPGHETEISIVDIDFD
PAKVETDTISLELTCSNRDLPASLTYGLPGGDLSMEGGGVIRTVALLRKPTHPSRFERGR
GAQWRLISHLSLNHLSLMQGGLEAFQEMLMLYDQTNSPISQRQISAIVGIEHKAAAAWLP
GNPFASLVRGIEIRLTVDEDGFVGSGLHAFAGLIDRFMGLYVQANSFSQLTVLSKRTGEE
LLKCSPRSGDLNLA
NT seq 1845 nt   +upstreamnt  +downstreamnt
gtgcaagacctgcttccttattacgaacgggaattgagcttcctgagacgatatcctcgt
gatttctcggagcgttatccaaagatcgccggtggtctgctgatggccggcgaggtatgc
gaagacccgcacatcgagcgcatgatccagtcgtacgcactgctcaatgcgcgcgtgtct
aaacgcctagacgatgactatccagagcttactgaagcactgttcgaggtcctttatccg
cactatctccggccgtttccgtcttgctcgattgcgcgcatggaccatctcgcctctgca
gaccagctcactgcgaccaccgaaatcccccgaggtagcttgttgtcgagcggccaggtc
aagggaatcgtctgtagattcaggactgcctatgatgtatcgatagcgccgatccgcctg
tctcaggtgacttttgcacccattatcgacgcaccagaggcggtgatgctgcagcccgga
atcagctcctcgctttccatcacttttgaatccttcgccgacaatgtaccctttgcatcc
ctgggattggcatcgttaaggttgttcattgacggagaggcttcattctgcgcggcgttg
cgcgacagccttttcatgcgtaccgaggccgcctgggttgaagcatccgggagcgggcga
tggatcgcgcttcgtcagccgccgctggcagaagtggggttcgccgaggaggacgcgcta
atcgatttcccctcacaatcccatcccgcgtatcggctgctgaccgagtattttgctctt
cccgaaaaattcaatttcttcgatcttgatcttggcgccgtgtttgcggttctgccatcc
ggtgccaggcgatttaccgtccatctcggactgtctggtttgcgagcggactctcacgtt
gcgcgacagctaggcagcatcagcaattccaacatcttgctgggttgtactccggtgatc
aatctattccctcatgccggcgacccgatcagattgacgcatgccggcgcctatcattcc
gtgttggtcgacggacggaacacgtttggctaccaggtacattcgatcaattcggtgcag
ctcctaaggcagactccgcagggcgaaacgattacccggtttcgccccttctattccttg
cgtcatggtcaatctcccgaacatgatggacattactggatcatgcggcgggatgaactg
gtggcgctgaaaagtccggggcacgaaaccgagatttccatcgtcgatatcgacttcgat
ccagccaaggtcgagacggatacgatcagcctcgagctgacctgctccaaccgggatctt
cctgcttcgttgacctatggcctgccgggcggcgacttgagcatggaaggcggcggtgta
atccgtacggtcgctctgctacgaaaaccgacccatccctcacgcttcgaacggggtcga
ggtgcccagtggcggctgatctcccatctttcgctcaatcatctttccctgatgcaggga
gggctggaggccttccaggaaatgctgatgctctacgaccaaaccaattcgcccatctcg
caacgtcagatcagcgccattgtggggattgaacacaaggcggccgcggcctggttgcca
ggaaatccgtttgcaagcctggtgcgcggaatcgagatcaggctgacggtggatgaggac
ggcttcgtcggcagtggcttgcatgcatttgccggcctgattgatcgtttcatggggctt
tatgtccaggccaacagcttttcgcaattgaccgtgctatcaaaaaggacaggggaggaa
ttgctgaaatgcagcccacgcagcggagatttgaacctggcgtga

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