Herbaspirillum frisingense: G5S34_22175
Help
Entry
G5S34_22175 CDS
T06761
Symbol
pcaF
Name
(GenBank) 3-oxoadipyl-CoA thiolase
KO
K07823
3-oxoadipyl-CoA thiolase [EC:
2.3.1.174
]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr00362
Benzoate degradation
hfr01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
G5S34_22175 (pcaF)
Enzymes [BR:
hfr01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.174 3-oxoadipyl-CoA thiolase
G5S34_22175 (pcaF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thiolase_N
Thiolase_C
ketoacyl-synt
Thiolase_C_1
GRDB
Motif
Other DBs
NCBI-ProteinID:
QNB09188
LinkDB
All DBs
Position
4887617..4888822
Genome browser
AA seq
401 aa
AA seq
DB search
MDAFICDAIRTPFGRYGGALGAVRADDLAAAPIRSLMARNPGVDWSQVDDILYGCANQAG
EDNRNVARMAGLLAGLPLEVPGTTINRLCGSSLDAVGMAARAIRSGEVQLMIAGGVESMT
RAPFVMGKADTAFSRSAAIFDTTIGWRFVNPLMQALHGIDSMPETAENVAEEFGIARADQ
DAFALRSQQRWTAAQAAGFFAGEIAPLAIPQKKGDPLLVATDEHPRPETTLATLSRLKGV
ARPDGTVTAGNASGVNDGACALLLASAKAVDRYRMRPRARVLGMASAGVAPRIMGFGPAP
AVRKVLAQVGLTLAQMDVIELNEAFAAQGLAVMRALGLPDDAAHVNPNGGAIAIGHPLGA
SGARLVTTAINQLERSGGRYALCTMCIGVGQGIALVIERVA
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggacgcattcatctgtgacgccatccgcacacccttcggccgctacggcggcgcattg
ggcgcggtgcgcgccgacgacctggctgccgcaccgatacgcagcctgatggcgcgcaat
cccggcgtggactggagccaggtcgacgacatcctctacggttgcgccaaccaggctggc
gaggacaaccgcaacgtggcccgcatggcggggctgctggcgggcctgccactggaggta
ccgggtaccaccatcaaccgcctgtgcggctccagcctggatgcggtgggcatggccgcc
cgcgccatccgctccggcgaggtgcagttgatgatcgccggtggcgtggagagcatgacg
cgcgcacccttcgtgatgggcaaggccgacactgccttctcgcgtagcgcggcaatcttc
gacaccaccatcggctggcgtttcgtcaatccgctgatgcaggcattacacggcatcgac
tccatgccggagacggccgagaacgtggccgaggaattcggtatcgctcgcgccgaccag
gacgccttcgccctgcgcagccagcaacgctggactgcggcgcaggcggccggcttcttc
gcgggagagatcgcgccgctggcgatcccgcagaagaagggcgatccgctgctcgtggct
accgacgaacatccgcgccccgagaccacgctggcgacgctgtcccgactcaagggcgtg
gcgcggcccgatggcacggtcacggccggcaatgcatcgggcgtcaacgacggtgcctgc
gcgctgctgctggcctcggccaaggcggtcgaccgctatcgcatgcggccacgcgcccgc
gtgctgggcatggccagtgccggggtggcgccacggatcatgggcttcggtccggcaccg
gcggtgcgcaaggtgctggcgcaagtgggcctgacgctggcgcaaatggacgtgatcgaa
ctcaacgaagcctttgccgcacaggggctggcggtgatgcgtgcactcggcctgccggac
gatgccgcccacgtcaatccgaatggcggcgccatcgccatcggccatccgctgggcgct
tcgggtgcacgtctggtgaccacggccatcaaccagttggaacgcagcggcggccgctat
gcgctctgcaccatgtgcatcggcgtggggcaagggatcgcgctggtgatcgagagggtg
gcctga
DBGET
integrated database retrieval system
