Herbaspirillum frisingense: G5S34_22565
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Entry
G5S34_22565 CDS
T06761
Name
(GenBank) DEAD/DEAH box helicase
Organism
hfr
Herbaspirillum frisingense
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Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
QNB09259
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All DBs
Position
complement(4970011..4973127)
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AA seq
1038 aa
AA seq
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MKPEFNSKRLYGITRSKGKMFEFGLPLQYHELKLGDSDEPQSILFFSIAVLADAAGLIND
GKPLNEEAVANLEFSAKYFDALLSSGLAEEVEEETLLLAAAAYYLVGRPGSSLVMARKLS
SSSFNSCADRLLVWILQADWQADFKLSGVLQRSIQIFRDEVRAHFLNGYISKDRNALSEE
LRGRAYESVHANDLISFELALAISQLRIASSSWTLLPRVTGIPATLWSETIGRASFPKEL
WPSQKRLADQGIFRGRSGIVQMPTSAGKTKAVEVILKSGFLSGRVKLAIIVAPFNALCNE
IGGALKAAFIGEDVKVNELSDALQKDFLKEIAELFEAAAAKFVFVLTPEKLLYILRQEPS
LADDIGLIIFDEAHQFDDHTRGVTYELLVTEIKRLIPAEAQTVLISAVIANARSVADWLM
GEDAPVVDGTGLLPTARSVAFANWADSLGQLMFYESERFDRPDYFLPRVIESSGLKKKNN
REKDRIFPDPESKVGRDVALYLGIKLVPQGSVAIFCGKKDQANDVAERAVDIFIRGYDAV
NPSKFSDSLEVERLTLLLEQHYGSESELTQAGKLGIFVHHGNIHRGLRLSIEFAMQRDLI
KFVVCTSTLAQGVNLPIRYLIVLSTRQSQHEIKVRDFQNLIGRAGRSGMHTEGLVIFSDP
TIFGSKGKIDSEFDFATKLLVSGNSEATTSALLGIVAPFQPQYNYWAAIEVPVATILTLI
YSDNAGIESWALDISRNYKGFSRDQDIKSLVAEVRRRKRLCQSLESFLMANRGDESFETF
LSRVEALAQSTLAYAIASDKGKERLIELFGAVALVVQEECPDIRKQAVFAKTLLGVQVSL
RIEQWATQNRLQILAAESNEELLDALWPIVMQEAESKMFTTTLPKELPQEIAEMWVGGSS
FKSIFDRVASRSGTKPHGDKRHKLSADDILKFCENALSFECGLILGAVSQFLFAAEETEE
SKALLIFQKAMKYGVPDSLSISAFEYGFADRVLSQFLCQELRENGYVGEHFSPAVKPHQT
VLQSMASAFPSYFQTLLP
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctgagtttaatagcaagcgtctgtatggcatcactcgttcgaagggaaagatg
ttcgagttcggacttcctttgcaatatcacgagttaaagcttggtgacagcgacgaaccg
cagtctattttattcttctctatcgctgttcttgcggacgcggctggactaattaatgac
ggaaagccccttaatgaagaagcggtggcgaatcttgaattctcggcgaaatattttgat
gccttactaagctcaggactggcggaagaagtggaggaggagacattgcttcttgctgcc
gcagcatactacctggttggtcgtcccggcagcagcttggtgatggctagaaagctgagt
agttcttcattcaattcgtgcgcggatcgccttttggtgtggatcttgcaggccgattgg
caagctgattttaaactgtcgggagtgctccaacgctctattcagattttcagagacgag
gttcgagcacattttctcaacgggtacatctcgaaggaccgcaacgccctttctgaagaa
ttacgcggtcgtgcctatgagtctgtccatgcgaatgacctaatttcatttgagttggcg
cttgcaatttcgcaacttcggatagcttcttccagctggacgctgttgccgcgagttact
ggaattccagcgacgttgtggagtgagaccattggccgagctagttttccaaaagaacta
tggccatcgcaaaagcgtcttgcagatcaaggaatatttagagggcggtcaggcattgtt
cagatgcctacgagtgcaggaaagaccaaagcggtagaagtcatcctcaaaagcggattt
ctatctggacgtgtgaaattagccattatcgtcgcgccatttaacgcactatgcaatgaa
atcgggggagcactaaaagcggcatttatcggtgaagatgtcaaagtgaacgagctttcg
gatgccttacaaaaggattttctgaaagaaattgctgagttatttgaggctgctgctgcc
aagtttgtttttgtgctgacgccagaaaagcttttatatattttgcgtcaggagccctcg
ttagcagatgacatcggtctaatcattttcgatgaggcgcatcaatttgacgaccatacc
agaggcgtaacttacgagttgttagttactgagatcaaacgccttattccagccgaagct
caaacagtgctgatttcggctgttattgcaaacgcacgatcagtggcagattggctgatg
ggtgaggatgctccagttgttgatggcactggtcttttgcccaccgctaggtctgttgca
ttcgctaattgggcagattcacttgggcagttgatgttttatgagtcagaacgttttgac
cgcccagactattttctgccacgagtgatagagtcatccggattgaaaaaaaagaacaac
cgggagaaagatcgcatttttcctgatccagagagtaaggtcggaagggatgtagcgctc
tatttgggaataaagcttgtgcctcagggtagcgttgctattttctgcgggaaaaaggat
caggcaaatgatgtggcagaacgggcggtagatatttttatccgaggttatgacgcagtt
aatcccagcaaattttcggactccttagaggttgagcggttaacgctactgcttgaacag
cattacggatcagaatccgagctaacccaggccgggaagttgggaatatttgtacatcac
gggaatattcatcggggacttcggttgtcaattgagttcgcgatgcaaagggatctcatc
aaatttgtcgtatgtacatcaacattggctcaaggtgttaatttgccaattcgctatttg
attgtattaagcacgcggcaatctcagcatgaaatcaaagtacgagacttccagaatctg
attggtcgcgctggtcgatcgggtatgcatacagaaggccttgttatcttttctgatcca
acaatattcggatccaaagggaagattgactcggagttcgattttgctaccaagctacta
gtttctggaaatagcgaagcgacgaccagtgctttgttgggtatcgtagccccgtttcag
ccgcaatataactattgggccgcgattgaagtacctgttgcgaccatactgacgttgata
tattcagacaacgcaggcatcgaaagttgggcgcttgatataagcagaaactataaaggg
ttttcgcgagatcaggatatcaaatctttggttgccgaggtgcgccgtagaaaaagactg
tgtcaatctctagaaagcttcctcatggctaatagaggtgatgaaagctttgagacattt
ttaagtagagttgaagcactggctcaatcgacccttgcttatgctattgcgtcagataag
ggtaaagagcggttgattgagctttttggtgcggtcgcacttgttgtccaggaggagtgc
ccagacattcgaaagcaagctgtgtttgccaagacgctattgggggtacaggttagtttg
cgcattgaacaatgggctactcagaacagactgcaaattttggctgctgagagcaatgaa
gaattgctggatgctttatggccaatagttatgcaagaagctgaatcgaagatgttcact
acgacactgcctaaagagctgcctcaagaaatcgcggagatgtgggtgggagggagcagt
tttaagtcgatttttgatagggtcgcatcacggtctgggacgaaaccgcatggggataag
cgacataaactttcagcggatgacattctaaaattttgcgaaaacgctctcagtttcgag
tgcggcctaattttgggggctgttagccagttcctctttgcggcagaggagaccgaagag
tcaaaagccctattgatatttcagaaggcaatgaagtatggagttccagattccctctcc
atttcggcatttgaatatggctttgcagatcgcgtgttgagccaatttttatgccaagag
cttcgcgagaatggctatgttggagagcatttttcgcctgccgttaagcctcatcaaact
gtcttgcagagtatggcgtcggcatttcctagttatttccagactctattgccgtga
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