Herbaspirillum frisingense: G5S34_23205
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Entry
G5S34_23205 CDS
T06761
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G5S34_23205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hfr03400
]
G5S34_23205
Enzymes [BR:
hfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G5S34_23205
DNA repair and recombination proteins [BR:
hfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G5S34_23205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_16
AAA_30
HypA
MlrA_helical
Zn_ribbon_TOP3B
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
QNB09382
LinkDB
All DBs
Position
complement(5112917..5115094)
Genome browser
AA seq
725 aa
AA seq
DB search
MEQRLLQVALDTPLHTVFDYRWKASSPDEPLPAIGQLVVVPFGRREAVGVVVGQDAQTDL
QADKIKDVIAVRHQLPPMSAHWLALCGFAADYYQRPLGEVMLPGLPKNLRALTTVALDKA
LKALGRLVPATKAKPRSRKKAAVAATVEEAIIDPVMADPSPDPLQLGAAPPLNPSQQQAV
DAIAGAEGFAPLLLYGVTGSGKTEVYLQAAAAILRRAAEQASSSGSPEPGQPTPASAPAQ
ILVLVPEINLTPQLEGNIRARFPHLNVVALHSGLAEGERARNWLAAHLGQAHIVLGTRLA
ILSSLPSLKLIVIDEEHDPSYKQQEGLRYSARDLAVWRAHQLGIPVVLGSATPSLETWQH
AQAGRYRRLELRQRAALQAVLPSVKVIDMERDKPVDGLTSTLIAAVRKRLEQGEQSLLFL
NRRGYAPVLACDACGWISNCMRCDAFMVVHRPERRLRCHHCSLELHIPRACPTCGNVDLQ
PLGRGTQRVEEGLHGIFPEARILRIDADSTRLKGSAQSAFDSVHRGEVDILIGTQMVAKG
HDFKKLTLVGVLNPDTALFSHDYRASERLFAQLMQVAGRAGRAGLSADGSSGEVLIQTRY
PHHPLYQAVIRHDYDGFAGELLDERRQAHFPPFMYQALLRAEGRELEIAMGFLKEAASLL
DAPAITINEPIPMTMMRVANVERAQLLIECPSRPTLQAFLKEWLALLRQMKTRARWSLEV
DPVDI
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
gtggaacaacgtctgcttcaggtcgcgctcgatacgcccctgcataccgtctttgattac
cgctggaaggccagttcgccggatgagccgttgccggcgatcggccaactggtggtggtc
cccttcggccgccgcgaagccgtcggggtggtcgtcggccaggatgcgcagaccgacctg
caggccgacaagatcaaggacgtcatcgccgtgcggcaccagttgccgccgatgtcagcg
cattggctggcactgtgcggctttgccgccgactactaccagcgtccgctgggtgaggtg
atgctgccggggttgcccaagaatctgcgggccctcaccacggtggcgctggacaaggca
ctcaaggccctgggccggcttgtgcccgccaccaaggccaagcccaggtccaggaaaaag
gcggcggtggccgccacggtggaggaagccatcatcgatcctgtgatggccgacccatcg
ccggacccgctgcaactgggtgccgcgccgccgctgaacccgtcccagcagcaggcggtc
gatgcgatcgccggtgccgagggtttcgccccgttgctgctgtatggcgtcaccggcagc
ggcaagaccgaggtctacctgcaggcggccgccgccatcctgcgtcgcgcggcagagcag
gccagctcatccggttcgcctgagcctggccagccgacgccggcttcggcccccgcccag
atcctggtgctggtgccggaaatcaacctgaccccgcagctggaaggcaacatccgcgca
cgtttcccgcatctgaatgtggtcgccctgcacagcggcctggccgagggcgagcgtgcc
cgcaactggctggcggcccacctggggcaggcgcacatcgtgctggggacgcggctggcg
atcctgtcgtcgctgccgtcactgaagctcatcgtcatcgacgaggaacacgacccctcc
tacaagcagcaggaaggtctgcgctactccgcgcgcgacctggccgtctggcgtgcgcac
cagctgggcatcccggtggtgctgggttcggccacaccctcgctggaaacctggcagcac
gcccaggccggccgctaccgccgcctggaactgcgccagcgcgctgcgctgcaggcggtg
ctgcccagcgtcaaggtgatcgacatggagcgcgacaagcccgtcgacggcctcacctcg
accctgatcgcggccgtgcgcaagcgcctggagcagggcgagcagtcgctgctgttcctc
aaccggcgtggctatgcgccggtgctggcctgcgacgcctgcggctggatcagcaactgc
atgcgctgcgatgccttcatggtggtacatcgccccgagcggcgcctgcgctgccaccat
tgcagcctggaactgcacattccacgcgcctgcccgacctgcggcaacgtcgacctgcaa
ccgttgggacgcggcacccagcgggtcgaagagggcctgcatggcatcttccccgaggcc
cgcatcctgcgcatcgatgccgactccacccgcctcaagggttcggcccagagcgccttc
gacagcgtgcaccggggcgaggtcgatatcctgatcggcacccagatggtggccaagggg
catgacttcaaaaagctcaccctggtgggcgtgctcaatcccgacaccgccctgttctcg
cacgactaccgcgccagcgagcgcctgttcgcgcaactgatgcaggtggccggccgcgcc
ggccgtgccgggctgtcggccgatggcagttcgggcgaagtgctgatccagacccgctat
ccgcatcacccgctgtaccaggccgtgatccgccacgactacgatggctttgccggtgaa
ttgctggacgagcggcgccaggcgcatttcccgcccttcatgtaccaggcactgttgcgc
gccgaaggccgcgaactggagatcgccatgggcttcctgaaggaagcggccagcttgctg
gacgccccggccatcaccatcaacgaaccgatcccgatgaccatgatgcgggtggccaat
gtcgagcgtgcccaattgctgatcgaatgtccctcgcgtccgacactgcaggctttcctc
aaggaatggctggccttgttgcggcagatgaagacccgcgcgcgctggtcgctggaagtc
gatccggtcgatatctga
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