Herbaspirillum frisingense: G5S34_23290
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Entry
G5S34_23290 CDS
T06761
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr00521
Streptomycin biosynthesis
hfr00523
Polyketide sugar unit biosynthesis
hfr00525
Acarbose and validamycin biosynthesis
hfr00541
Biosynthesis of various nucleotide sugars
hfr01100
Metabolic pathways
hfr01110
Biosynthesis of secondary metabolites
hfr01250
Biosynthesis of nucleotide sugars
Module
hfr_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
G5S34_23290 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
G5S34_23290 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
G5S34_23290 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
G5S34_23290 (rfbB)
00525 Acarbose and validamycin biosynthesis
G5S34_23290 (rfbB)
Enzymes [BR:
hfr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
G5S34_23290 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
Mitofissin
Motif
Other DBs
NCBI-ProteinID:
QNB09399
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All DBs
Position
5130030..5131109
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AA seq
359 aa
AA seq
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MIFITGGAGFIGSNFILDWLTQSTAEPVLNIDKLTYAGNPYNLGAVEKDARYAFVQADIC
DETAMATLLSRYRPRAIIHFAAESHVDRSIRSPDEFIRTNVNGTFNLLNRALQYWLTLPG
PEKTDFRFLHISTDEVYGSLAPEDAPFTEASPYAPNSLYSASKAASDHLVRAYHQTYGLP
TLSTNCSNNYGPFHFPEKLIPLVISNALAGNPLPVYGDGLQIRDWLFVTDHCAALRTVLA
NGTVGETYNIGGGNEHTNLHVVHTLCDILDELAARPQGSYRDLITFVKDRPGHDRRYAID
AGKIKRELGWQPAESFETGIRKTVQWYLAHGEWVRQVRSGDYLNWLRQQYGDHPPGALI
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgattttcatcactggcggtgccggcttcatcggcagcaacttcatcctcgactggttg
acgcagagcacggccgaacccgtgctcaacatcgacaagctgacctacgccggcaacccc
tataacctgggcgcggtcgagaaagatgcgcgctatgccttcgtgcaggccgatatctgc
gatgagacagcgatggctaccttgctctcgcgctaccgcccacgcgcgatcattcacttc
gccgccgaaagccacgtcgatcgttccatccgcagtcccgacgagttcatccgtaccaac
gtcaatggcaccttcaatctgctcaacagggcgttgcagtattggctgacgctgccgggc
ccggaaaaaacggacttccgcttcctgcacatctccaccgatgaagtctatggcagcctg
gcgccggaagatgcgccatttacggaagcttcaccgtatgcgcccaatagcctctactcg
gcgtccaaggcggcatccgaccatctggtgcgggcctatcatcaaacctatggattgccg
acactgtccaccaactgctccaacaactacggcccctttcacttcccggaaaagctgatc
ccgctggtcatttccaacgccctcgcgggaaatccccttcctgtctacggcgatggcttg
cagattcgggactggctgttcgtgaccgatcactgtgccgcattgcgaacagttctggcc
aacggtacggtaggcgagacctacaacatcggcgggggcaacgaacataccaatctgcac
gtggtgcacaccctctgcgatatcctggacgaactggcggcgcgaccgcagggcagctat
cgcgacctgatcaccttcgtcaaggaccggcccggacatgatcgtcgctatgccatcgac
gccgggaagatcaaacgcgaactgggctggcaaccggcggaatccttcgagaccggcatc
cgcaaaacggtgcagtggtatctggcgcatggtgaatgggtacgccaggtgcgctcgggc
gattacctgaactggctgcggcagcaatacggcgatcatccaccgggagcactgatatga
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