KEGG   Herbaspirillum frisingense: G5S34_23290
Entry
G5S34_23290       CDS       T06761                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
hfr  Herbaspirillum frisingense
Pathway
hfr00521  Streptomycin biosynthesis
hfr00523  Polyketide sugar unit biosynthesis
hfr00525  Acarbose and validamycin biosynthesis
hfr00541  Biosynthesis of various nucleotide sugars
hfr01100  Metabolic pathways
hfr01110  Biosynthesis of secondary metabolites
hfr01250  Biosynthesis of nucleotide sugars
Module
hfr_M00793  dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:hfr00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    G5S34_23290 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    G5S34_23290 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    G5S34_23290 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    G5S34_23290 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    G5S34_23290 (rfbB)
Enzymes [BR:hfr01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     G5S34_23290 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 3Beta_HSD NAD_binding_4 adh_short KR Mitofissin
Other DBs
NCBI-ProteinID: QNB09399
LinkDB
Position
5130030..5131109
AA seq 359 aa
MIFITGGAGFIGSNFILDWLTQSTAEPVLNIDKLTYAGNPYNLGAVEKDARYAFVQADIC
DETAMATLLSRYRPRAIIHFAAESHVDRSIRSPDEFIRTNVNGTFNLLNRALQYWLTLPG
PEKTDFRFLHISTDEVYGSLAPEDAPFTEASPYAPNSLYSASKAASDHLVRAYHQTYGLP
TLSTNCSNNYGPFHFPEKLIPLVISNALAGNPLPVYGDGLQIRDWLFVTDHCAALRTVLA
NGTVGETYNIGGGNEHTNLHVVHTLCDILDELAARPQGSYRDLITFVKDRPGHDRRYAID
AGKIKRELGWQPAESFETGIRKTVQWYLAHGEWVRQVRSGDYLNWLRQQYGDHPPGALI
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgattttcatcactggcggtgccggcttcatcggcagcaacttcatcctcgactggttg
acgcagagcacggccgaacccgtgctcaacatcgacaagctgacctacgccggcaacccc
tataacctgggcgcggtcgagaaagatgcgcgctatgccttcgtgcaggccgatatctgc
gatgagacagcgatggctaccttgctctcgcgctaccgcccacgcgcgatcattcacttc
gccgccgaaagccacgtcgatcgttccatccgcagtcccgacgagttcatccgtaccaac
gtcaatggcaccttcaatctgctcaacagggcgttgcagtattggctgacgctgccgggc
ccggaaaaaacggacttccgcttcctgcacatctccaccgatgaagtctatggcagcctg
gcgccggaagatgcgccatttacggaagcttcaccgtatgcgcccaatagcctctactcg
gcgtccaaggcggcatccgaccatctggtgcgggcctatcatcaaacctatggattgccg
acactgtccaccaactgctccaacaactacggcccctttcacttcccggaaaagctgatc
ccgctggtcatttccaacgccctcgcgggaaatccccttcctgtctacggcgatggcttg
cagattcgggactggctgttcgtgaccgatcactgtgccgcattgcgaacagttctggcc
aacggtacggtaggcgagacctacaacatcggcgggggcaacgaacataccaatctgcac
gtggtgcacaccctctgcgatatcctggacgaactggcggcgcgaccgcagggcagctat
cgcgacctgatcaccttcgtcaaggaccggcccggacatgatcgtcgctatgccatcgac
gccgggaagatcaaacgcgaactgggctggcaaccggcggaatccttcgagaccggcatc
cgcaaaacggtgcagtggtatctggcgcatggtgaatgggtacgccaggtgcgctcgggc
gattacctgaactggctgcggcagcaatacggcgatcatccaccgggagcactgatatga

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