Herbaspirillum frisingense: G5S34_23300
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Entry
G5S34_23300 CDS
T06761
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr00521
Streptomycin biosynthesis
hfr00523
Polyketide sugar unit biosynthesis
hfr00541
Biosynthesis of various nucleotide sugars
hfr01100
Metabolic pathways
hfr01110
Biosynthesis of secondary metabolites
hfr01250
Biosynthesis of nucleotide sugars
Module
hfr_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
G5S34_23300 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
G5S34_23300 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
G5S34_23300 (rfbC)
Enzymes [BR:
hfr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
G5S34_23300 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QNB09401
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Position
5132031..5132576
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AA seq
181 aa
AA seq
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MLVTPTPLAGLMLIQPQVFSDSRGFFYESFNERDFRARTGADVRFVQDNHSLSVRGVVRG
LHYQLPQAQGKLVRVTRGAVLDVVLDIRRSSPTFGQWFSQVLSASNQLQLWLPAGFAHGF
SVLEDETECLYKTTDYWMPEQEHTILWNDPALAIDWQLQGEAILSDKDRNGIPLAQAAVF
E
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcacccccactcccctagcgggcctgatgctgatccaaccccaggtcttcagc
gacagtcgcggcttcttctacgaaagcttcaacgagcgcgacttccgcgcacggaccggg
gccgatgtccgtttcgtacaggataaccactctctctccgtgcgcggtgtcgtgcgcggt
ctgcattaccagctcccgcaggcacagggcaagctggtacgggtcacccggggtgcagtg
ctggatgtggtgcttgatatccgtcgcagttcgcctactttcggtcagtggttcagccag
gtcctgagcgcgagcaaccagctgcaactttggttgccggcgggattcgcgcatggattc
tcggtcctggaagatgagaccgaatgcctttacaagaccaccgattactggatgccggaa
caggaacacaccattctctggaatgacccggcgctggctatcgattggcaactgcaaggg
gaagctatcctgtccgacaaggatagaaacgggattccgctggcgcaggctgcggtgttc
gaatga
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