Herbaspirillum frisingense: G5S34_24500
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Entry
G5S34_24500 CDS
T06761
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G5S34_24500 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hfr03400
]
G5S34_24500 (xth)
Enzymes [BR:
hfr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
G5S34_24500 (xth)
DNA repair and recombination proteins [BR:
hfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
G5S34_24500 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QNB09615
UniProt:
A0A7G6B2Y1
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All DBs
Position
5393221..5393997
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AA seq
258 aa
AA seq
DB search
MPKIVSANLNGIRSAAKKGFFEWLQKEAPDFVCVQELKAQAADMTDEFLAPAGYVGHFHY
AQKKGYSGVGVYSRRQPDSVRIGFGNTEFDDEGRYVECDYGDLTVISLYAPSGSSSEERQ
EAKFRFMEAFLPHLMDLEKSGREVVICGDWNIAHKEIDLKNWKSNQKNSGFLPEERAWMT
RIFDQLGLVDVYRRLHPETTGEAYTWWSNRGQAWANNVGWRIDYHVSTPGIAAKAVSAAI
YKEQRFSDHAPLTVVYGD
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaatcgtctccgccaacctcaacggaatccgctcggccgccaagaagggcttc
ttcgaatggctgcagaaggaagcgccggacttcgtctgcgtgcaggaactgaaggcccag
gcggccgacatgaccgatgaattcctggccccggccggttatgtcgggcatttccactat
gcccagaaaaaaggctactcgggcgtgggcgtctacagccgccgccagccggattcggtg
cgcatcggcttcggcaataccgagttcgatgacgaaggccgctatgtggaatgcgactat
ggcgacctcaccgtgatttcgctctacgcaccctcgggctcgtccagcgaggaacgccag
gaagccaagttccgcttcatggaagccttcctgccgcacctgatggacctggaaaagagc
ggccgcgaagtcgtcatctgcggcgactggaacatcgcccacaaggaaatcgacctgaag
aactggaagagcaaccagaagaattccggcttcctgccagaggagcgcgcctggatgacg
cgcatcttcgaccagctgggcctggtggacgtgtaccgccgcctgcatcccgagaccacc
ggcgaggcctatacctggtggagcaatcgcggccaggcctgggccaacaacgtggggtgg
cgcatcgattatcacgtctccaccccgggcattgccgccaaggccgtgagcgcggcgatc
tacaaggagcagcgcttctctgaccatgcgccgctgacggtggtctacggcgactga
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