Candidatus Hydrogenisulfobacillus filiaventi: R50_0907
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Entry
R50_0907 CDS
T08923
Symbol
mutS
Name
(GenBank) Endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
hfv
Candidatus Hydrogenisulfobacillus filiaventi
Pathway
hfv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
R50_0907 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hfv03400
]
R50_0907 (mutS)
DNA repair and recombination proteins [BR:
hfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
R50_0907 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
ADIP
Filament
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAB1128413
UniProt:
A0A6F8ZFK1
LinkDB
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Position
1:858426..860762
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AA seq
778 aa
AA seq
DB search
MTTTQGAGGDWLRNALDLERVLARIREQAETPMGADRVAALAPPLPDPVSAQALGREAET
LLALGAGLAGAVRVGRLARRAARGGVLDAGELAGVARTLARTETVRAKAEPGLTPGWAAR
LGALALPGALREAVERVVAPDGSVRDTASPLLADLRARQRRLWEEIDGILAGILHSPHWA
PYLQEPVVTERAGRRVVPVKVGFRNKVAGIVHDQSASGQTVFVEPMAVVDRHNRIALLLR
EETAEIERLLTELSRAVGAEAPALEAVEEVLADLDVALAGVRYGQGLDGRWPRLGGQRFL
IRSGRHPLLQDPVPLDLAVEDRRPVLVITGPNTGGKTVALKTAGLVAALALLGMMVPAAE
GTEVPLYTAILADIGDEQSLEQNLSTFASHIARLVPLVRLADAGARPLLALIDEIGAGTD
PDEGAALAQALVERLAAAGVHTLVSTHFGRLKLLAYEDPRIQNARVEFDRETLAPTYRLV
LGQPGSSHALYIAARLGLDAALVQRARELIGERGQALEGAIEAVGTLTRRLEETERELEA
RRRDLEAEEAALRARITRWEERRQAEEERLRVQWQAELRRLREEVRRLAAQVEASEGKAR
FQALEELRRTLREAAPPPPVAGPPGPAPALTVGVRVRIRGFEDPGVVQELAGRTATVEVG
GMRIKLPVEELELAEAPAAARPRGGGRTPATAARMARVSPEEDVRGLTVDDALAVVDKFL
DNALLLGLDTVRIIHGKGTGTLRRALNAWLAHDPRVAERRLGGPAEGGDGVTVVRLKG
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccacgcaaggcgcagggggagactggctgcgcaacgccctcgacctggagcgg
gtgctggcccgcatccgggagcaggccgagacccccatgggagccgaccgcgttgccgcc
ctggcgccgccgctgccggacccggtctccgcccaggccctgggccgcgaagccgagacc
ctactggcgctgggggccgggctggcgggggcggtgcgggtgggccgcctagcccggcgc
gccgcccggggcggcgtgctcgacgccggggaactggcgggggtggcccggaccctggcg
cggacggagacggtgcgggccaaggccgagcccggcctcacccccggctgggccgcccgc
ctgggcgcgctggccctgccgggggccctgcgggaggccgtggaacgggtggtggcgccc
gacgggtcggtgcgggacaccgccagcccgctgctggccgacctgcgcgcccgccagcgc
cggttgtgggaggagatcgacggcatcctggccggcatcctgcattcgccccactgggcg
ccctacctgcaggagccggtggtcacggaacgggccggccggcgggtggtgccggtcaag
gtggggttccgcaacaaggtggccggcatcgtccacgaccagtcggccagcggccagacg
gtgttcgtggagccgatggcggtggtggaccgccacaaccgcattgccctcctgctgcgg
gaggagacggcggagattgagcgcctgctgaccgagctgtcgcgggcggtgggggcggag
gcgcccgctctggaggcggtggaagaggtgctggccgacctcgacgtggccctggccggg
gtccgctacggacaggggctggacggccgctggccgcgcctgggcgggcagcgcttcctc
atccggtccggacgccaccccctccttcaggaccctgtgcccctggacctggcagtggag
gaccggcggccggtgctggtcatcaccgggcccaacaccgggggcaagacggtggccttg
aaaaccgccgggctggtcgcggccctggccctgctggggatgatggtgccggcggcggag
gggaccgaggtcccgctgtataccgctatcctggccgacatcggggacgagcagagcctg
gaacagaacctgtccacctttgccagtcacatcgcccgcctggtgccgctggtgcggctg
gcggatgcaggggcgcggccgctgttggccctcatcgacgagatcggggccggcaccgac
ccggatgaaggcgcggccttggcccaggccctggtggagcgactggcggcagccggggtg
cacaccctggtcagcacccacttcgggcgcctcaagctgttggcgtacgaggacccgcgc
atccagaacgcgcgggtcgaattcgaccgcgaaaccctggcccccacctaccgcctggtg
ctggggcagccgggcagctcccacgccctctacatcgcggcccggctggggctggatgcg
gccctggtgcagcgggcgcgggagctgatcggcgagcgggggcaggccctggagggggcc
attgaagcggtgggcaccctgacccgccggctggaggagacggaacgggagctggaggca
cgccggcgcgacctggaggcggaggaggctgccctgcgggcccgcatcacccgctgggag
gagcggcgccaggcggaggaggagcgcctgcgcgtgcagtggcaggcggagctccggcgc
ctgcgtgaggaggtgcggcggctggcggcccaggtcgaagccagcgagggcaaggcccgc
tttcaggccctggaggagctgcggcggaccctgcgcgaggcggccccgccgcccccggtg
gcggggccaccggggccggctcctgccctgacggtgggggtgcgcgtccgtatccgcggg
tttgaggatcccggggtggtgcaggagctggcgggacgcaccgccaccgtggaggtgggg
ggcatgcgcatcaagctgccggtggaggagctggagctggcggaagccccggcggcggcc
cgtccgcgcgggggcgggcgcacccccgccaccgccgcccgcatggcccgcgtctccccc
gaggaggatgtgcgcgggctgacggtggacgatgccctggcggtggtggacaagttccta
gacaacgccctgctgctgggactggacacggtgcgtatcatccacggcaagggcaccggc
accctgcgccgggccttgaacgcctggctggcccatgatccccgcgtggcggagcggcgg
ctgggggggccggccgagggcggcgacggggtcacggtggtacggctcaagggctga
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