Candidatus Hydrogenisulfobacillus filiaventi: R50_1007
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Entry
R50_1007 CDS
T08923
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
hfv
Candidatus Hydrogenisulfobacillus filiaventi
Pathway
hfv00470
D-Amino acid metabolism
hfv00550
Peptidoglycan biosynthesis
hfv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hfv00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
R50_1007 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R50_1007 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hfv01011
]
R50_1007 (murD)
Enzymes [BR:
hfv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
R50_1007 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
hfv01011
]
Precursor biosynthesis
Amino acid ligase
R50_1007 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
CAB1128513
UniProt:
A0A6F8ZFV0
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All DBs
Position
1:958254..959705
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AA seq
483 aa
AA seq
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MEQPAVAQAIVGLGVNNRPLVPYLLARTPRIAVADRLPEEALRRILAGMGADPARVLVLG
GPDYLQQLAALPGLRSVYLTPGMVKDTPELRALEARGVRLTCETDLFLQVVPAPVVGITG
SSGKTTTTTLTGLALGRWAARTGRQAFVGGNIGHPLLPELGAMRPEDRVVLELSSFQLER
VERSPWGAVLLNLSPNHLDVHGTLEAYAAAKSRIFRYQGPDDWLVVPWGDPVVTALWEGV
HRGRRWFFSPGDPGMAGYRGTLVADGYLWFQDDHGRQPVLAVQDLRLPGRHNLANAAAAT
AAVLAAGGAVEDIAPVLASFSGVPHRLEPVGMVGGVRFINDSIATTPDRTLAALAAVPGP
LVVILGGYDKHLDFAPLARGLLQAPVRAVVLLGATAGRIAGALEAAAGPAGPPFVVEHAA
GFDEAVSRARALARPGDAVLLSPACASYDMFPNFEVRGERFRTLVQNWAGEAAGPVSERE
GGV
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
gtggaacagccggccgtagcgcaggcgatcgtggggctgggggtgaacaaccgccccctg
gtgccctacctgctggcgcggacgccgcgcatcgcggtggccgaccgcctgccggaggag
gccctccggcgcatcctggcggggatgggggcggaccccgcgcgggtgctggtgctgggc
ggaccggattacctgcaacagctggccgctttgcccggcctgcgcagcgtctacctgacc
ccggggatggtgaaggataccccggaactgcgggcgctggaggcgcggggggtccggctc
acctgcgagaccgatctcttcctgcaagtggtgcccgccccggtggtgggcatcacgggg
tcgtccggcaagaccaccaccaccaccctgaccggtctggccctgggccggtgggcagcc
cgcaccggccggcaggcctttgtgggcggcaatatcggccatcccctcctgcctgaactg
ggggcgatgcggccggaggaccgggtggtgctggagctgtccagcttccagctggagcgg
gtggagcgcagcccctggggggcggtgctgcttaacctgagccccaaccacctggacgtg
cacggcaccctggaggcctatgcggcagccaaaagccgcatcttccgctaccaggggccg
gacgactggctggtagtgccctggggcgacccggtggtcaccgccttgtgggagggggtg
caccgcggccggcggtggtttttcagccccggggacccggggatggcgggttaccggggt
acactggtggcggacggctacctctggtttcaggatgatcatggccggcagccggtgctg
gcggtgcaagacctgcgcctgcccggccggcacaacctggctaacgccgcggcggccacc
gcggcggtgctggccgccggcggggcggtggaggacatcgcccccgtgctggccagcttc
agcggggtgccgcaccgcctggagcccgtggggatggtgggcggggtacgcttcatcaac
gactccatcgccaccacccccgaccgcaccctggctgcattggcggcggtaccgggaccg
ctggtggtgatcctgggcgggtacgataagcacctggactttgcgcccctggcccgaggt
ctgctgcaggccccggtacgggcggtggtcctgctgggggcgacggcgggacgtatcgcc
ggggctctggaggcggcggcgggaccggcagggccgccgttcgtggttgaacatgcggcc
gggttcgacgaggcggtgagccgggcgcgtgcgctggcccggcccggggatgcggtcctg
ctgtccccggcctgcgccagctacgacatgttccccaattttgaggtccggggggagcgg
ttccggaccctggttcagaactgggccggcgaggcggccggtccggtgtcggaaagggag
ggtggagtatga
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