Candidatus Hydrogenisulfobacillus filiaventi: R50_1009
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Entry
R50_1009 CDS
T08923
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hfv
Candidatus Hydrogenisulfobacillus filiaventi
Pathway
hfv03030
DNA replication
hfv03430
Mismatch repair
hfv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R50_1009
03430 Mismatch repair
R50_1009
03440 Homologous recombination
R50_1009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hfv03032
]
R50_1009
03400 DNA repair and recombination proteins [BR:
hfv03400
]
R50_1009
Enzymes [BR:
hfv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R50_1009
DNA replication proteins [BR:
hfv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R50_1009
DNA repair and recombination proteins [BR:
hfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R50_1009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
Motif
Other DBs
NCBI-ProteinID:
CAB1128515
UniProt:
A0A6F8ZFJ3
LinkDB
All DBs
Position
1:961553..964339
Genome browser
AA seq
928 aa
AA seq
DB search
MTGVAAGPLLGLRSPYVPGRALLDLDQALEAAAARGWRLVALADDPALPAGVAFWRAARA
RGLVPYLAVERLLLGAGGARPVHLWAGGEAGWRVLCRLALEPDPLPWDRVRPWLGRALWV
SGEPGALPPGPGVRAEFEPGQAVPEGPALAVWWAAFRDPADLEAYRVLAALHSRRPDPRA
RPVVARAALAAACRGCREEMPFDPPELPDSRPKLPRFLPGAEVAAELALLEGRVRTGARR
RWGPGWPQREGLRSRLEQELEVIGALGFAGYFLIVEDLVNEARRLGIRVGPGRGSAAGSA
VAYALGITAIDPLRYGLRFERFLNPDRKGLPDIDLDFADARRLELVEYLRRRWTPERTAQ
IGTWGTFGPRAVLRDLGRWGGVPAPLVEAAVRTLPAVGGRLADGGADLERALARWPTARP
WLDLARRLEGLPRHASVHAAGVVITPGPLWDFLPVRQAEGGFVTAPDRAGVEALGLLKLD
LLGLRTLSVLDAVEEGVRAAGAEPPALGAAPPDDPETLALLGAGDTEGVFQLDSAGVRDL
LRRMRPRHLEEVMAVVALYRPGPMTMIPEYLERRRSGVPPGDPLAGVCRDTYGVLVYQEQ
LMQLAQELAGFSPGEADALRRAVSKKDHALLEELGGRLRAALAAAGLGEAEVAALWARIA
AFGDYGFNKAHAAGYGLLAYHLAYLKAHHPLEFWSAQLAGIRDSDRLAAALRACVQSGIT
VLRPRLDRPQPGRPFRPAGPAALQAGLAVIRGLGEAHARLVAEELDRNGPFVSRAEAARR
LLPRLGARAWAALEAAGALPAEGEVPAAGTAGGQLSLFGEAPGPAAPAPAGPDDGTAFGF
PWPEPAGVWVVKLAGSGTAAALEGLAAVARAWPGGWSWVQVVGRGRGRRLPLPGAAGDPR
VRQAALGVAGVEGCVAQIRPNGPVPPVS
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgacaggcgttgcggcgggaccgctgttgggcttgcggtcgccctatgtgcccggccgt
gccctgctggacctcgaccaggcgctggaggcggccgccgcccggggatggcggctggtg
gccctggcggacgatcctgccctgccggccggggtcgccttctggcgggcagcccgggcc
cgggggctggtgccgtacctggcggtggaacggctgctgctgggggcaggcggtgcccgc
ccggtccacctgtgggccggcggcgaagcgggctggcgggtgctctgccggctggccctg
gaaccggatccgctgccgtgggaccgggtacggccctggttggggcgggccctctgggtg
agcggggagccgggggcgctgccccccggcccgggggtgcgcgcggagtttgaacccggg
caggcggttcccgagggccctgccctggcggtgtggtgggcggcctttcgggacccggcc
gacctggaggcctaccgggtgctggcggccctgcacagccggcggcccgaccccagggcc
cgtccggtggtggcccgcgcggccctggctgccgcctgccgggggtgccgggaggagatg
ccctttgacccgccggagctgcccgacagccggcccaagctgccccgcttcctgccgggg
gcggaggtggcggcggagctggccctgctggaaggccgggtgcggaccggggcccgccgc
cgctgggggccgggctggccgcagcgggaagggctgcggagccgcctggaacaggagctg
gaggtgatcggggccctcggctttgccggctatttcctgatcgtggaggacctggtcaac
gaggcccggcgcctggggatccgggtggggcccggacgggggtccgcggctggcagcgcg
gtggcctacgccctgggcattacggccatcgatcccctccgttacggactgcggttcgaa
cgcttcctcaacccagaccgcaagggattgcctgacatcgacctcgacttcgctgatgcc
cggcgcctggagctggtggaatacctgcgccggcgctggaccccggagcgcacggcgcaa
atcggcacctggggcaccttcgggccacgggcggtgctgcgcgacctgggccgttggggc
ggtgtcccggcccccctggtggaagcggcggtgcgcacgctgccggccgtcggcgggagg
ctggccgatggcggggccgacctggaacgggccctggcccgctggcccaccgcacgaccg
tggctggacctggcccgccggctggaagggctgccccggcatgcgtcggtacatgccgcc
ggggtggtgattacccccgggcccttatgggatttcctgccggtgcgtcaggccgagggc
gggttcgtgaccgcgcctgaccgggcgggggtggaggccctgggcctgctcaagctggac
ctgctgggcctgcggacgttgagcgtgctcgacgccgtggaggagggggtgcgcgcggcc
ggggccgagcctcccgccttgggggccgcccctcccgacgatccggagaccctggccctg
ttgggggccggggacaccgagggggtcttccagctggacagcgcgggggtgcgcgacctg
ctgcgccggatgcggccccgccatctggaggaggtgatggcggtggtcgccctctaccgg
ccgggccccatgaccatgatccccgaatacctggagcgccgccgcagcggcgtgcctccc
ggcgatcccctggcgggggtatgccgcgatacctacggcgtgctggtctaccaggaacag
ttgatgcagctggcccaggaactggccggcttcagccccggcgaggccgatgccctgcgg
cgggcggtgagcaaaaaggatcatgccctgctggaggagctgggcggccgcctgcgggca
gccctggccgccgctggcctgggggaggctgaggtcgccgccctctgggcccgcatcgcc
gccttcggggactatggcttcaataaagcccacgccgccggctacgggctgctggcctac
cacctggcctatctcaaggcgcaccatcccctggagttctggtccgcccagctggcgggg
atccgggacagcgaccggctggcggccgcactgcgcgcctgcgtccagagcgggatcacc
gtgctgcgcccgcggctggaccggccgcagccgggccggccgttccggcctgcgggtccg
gccgcgctgcaggcggggctggcggtgatccgcggcctcggggaagcgcatgcccgcctg
gtggcggaggagctggaccgcaacggccccttcgtcagccgggcggaggcggcccgccgt
ctgctgccgcgcctgggggcgcgggcctgggcggcgttggaggcggcgggagcgctgccg
gcggagggggaggtgccggccgcgggcacggccgggggccagttgtccctgttcggggag
gctccgggcccggccgcgccggcgccggccgggccggatgacggcaccgccttcgggttt
ccctggccggagccggcgggggtctgggtggtgaagctggccgggagcgggacagctgcg
gccctggaaggcctggcggccgtggcgcgcgcctggcccggcgggtggagctgggtgcag
gtcgtgggccgcggccggggacggcgtctgcccctgccgggagcggccggggatccccgg
gtgcggcaggcggcgctgggcgtggcgggggtggagggctgcgtggcacagatccgcccg
aacgggccggttccgccggtgtcttga
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