Candidatus Hydrogenisulfobacillus filiaventi: R50_1183
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Entry
R50_1183 CDS
T08923
Symbol
sigF
Name
(GenBank) RNA polymerase sporulation-specific sigma factor (sigma-F)
KO
K03091
RNA polymerase sigma-E/F/G factor
Organism
hfv
Candidatus Hydrogenisulfobacillus filiaventi
Brite
KEGG Orthology (KO) [BR:
hfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hfv03021
]
R50_1183 (sigF)
Transcription machinery [BR:
hfv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
R50_1183 (sigF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_3
HTH_31
MarR_2
HTH_28
HTH_23
HTH_25
HTH_37
HTH_19
GerE
Sigma70_ECF
KORA
HTH_16
HTH_1
Motif
Other DBs
NCBI-ProteinID:
CAB1128689
UniProt:
A0A6F8ZFB5
LinkDB
All DBs
Position
1:1108512..1109288
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AA seq
258 aa
AA seq
DB search
MSNNHPGADLDPPSEAEWFRRAQAGDPDARRVLVERHWNLVWHIVHRFQGRGYEAEDLFQ
VGAIGLLKAIDRFEVERGLKFSTYAVPLIMGEIRRYLRDDQPLRVSRSVRELGVRIEQTR
QRLSQAWGRDPTVEELAGELGLDPTAITEAMEAVQPPASLHQTLDSPHGGETRLLDNIPD
PRSEAEWLEQLALTQAFQALDARDRYILQARFAEGRTQSEVAERLHISQVQVSRLERRAL
ERLRRALSEETTGRRPAP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtccaataaccaccccggcgccgacctcgaccccccctccgaggctgaatggttccgc
cgtgcccaggccggggatcccgacgcccgccgggtgctggtggagcggcactggaacctg
gtgtggcacatcgtgcatcgtttccagggccgcggctatgaggcggaggacctgttccaa
gtgggagccatcgggcttctcaaggccatcgaccgctttgaggtggagcggggcctgaaa
ttctccacctatgccgtgcccctgatcatgggcgagatccgccgttatctgcgcgacgac
cagcccttgcgggtgtcgcggtcggtgcgcgaactcggggtgcgcatcgaacagacccgg
cagcgcctgagccaggcctggggccgggatccaaccgtggaggagctggcaggggagctg
ggcctggaccccacggccattaccgaagctatggaggcggttcagccccccgcctcgctc
catcagaccctggacagcccccatggcggggagacgcgcctgctcgacaacatcccggat
ccccgttcggaggcggaatggcttgagcagctggcgctgacccaggccttccaagccctg
gatgcccgcgaccggtatatcctgcaggcgcggtttgcggagggccggacccagagcgag
gtggcagagcgcctgcacatctcccaggtccaggtttctcggctggaacgccgggctctg
gagcgcctgcgccgggctctgagcgaggagacgaccgggcgccggccggcgccctga
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