Candidatus Hydrogenisulfobacillus filiaventi: R50_1243
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Entry
R50_1243 CDS
T08923
Symbol
miaB
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
hfv
Candidatus Hydrogenisulfobacillus filiaventi
Brite
KEGG Orthology (KO) [BR:
hfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hfv03016
]
R50_1243 (miaB)
Enzymes [BR:
hfv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
R50_1243 (miaB)
Transfer RNA biogenesis [BR:
hfv03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
R50_1243 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
CAB1128749
UniProt:
A0A6F8ZFI1
LinkDB
All DBs
Position
1:1158686..1160074
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AA seq
462 aa
AA seq
DB search
MSAPRYFIRTYGCQMNERDSEILAGQLEQLGYRPAKDETAADLVVVNTCAVRHSAESHAF
GYIGGLKELKDQRRGLRIAVAGCMAQEPETVAWLRRHAPHVDLVFGTHNLHRLPELLERA
EAAGEMVVDVWDSAGEVQEHLPSRRRAGRRAFVNVIYGCDKFCTFCIVPYTRGRERSRRP
EAVLEEVRALAAEGFSDVTLLGQNVNSYGHDLDPAADLADLLTAAAAVPGIRWVRYLTSH
PKDFSSRLIAAIAGDPRITRHLHLPVQSGSTPVLKRMNRKYTAEQYRDLVARIRAAIPDV
VLTTDIIVGFPGETEADFAATLDLVRDLRFDAAFTFLYSARAGTPAARWEAREPVPNPVK
KARLNRLMELQYAISLEANQAWVGRQEVVLVEGVSRKNPGVWSARTRDNKVVLLDRDPGV
ELADRFVPVRITGARTFYLTGEVAGAPLDDPLPPRDVALPLA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcaccgcgttactttatccgcacctacggctgtcagatgaacgaacgggactcc
gaaatcctggccggccagctggagcagctgggctatcgtccggccaaggacgagacggcc
gccgacctggtggtggtcaacacctgtgccgtgcggcacagtgccgaaagccacgccttc
gggtacatcggcggcctcaaggagctgaaggatcaacgccgcggcctgcggattgccgtg
gcgggctgcatggcccaggaaccggaaaccgtggcctggttgcggcgtcatgccccccat
gtggacctggtgttcggcacccacaacctccatcgcctgccggagctgctggagagggcg
gaggcggcgggggagatggtggtggacgtctgggacagcgccggcgaggtccaggaacac
ctgcccagccggcggcgggcgggccgccgggccttcgttaacgtcatctacggctgcgac
aagttttgcaccttttgcatcgtaccctatacccgcgggcgggaacggtcccggcgcccg
gaggcggtgctggaggaggtccgggcgctggcggccgagggattcagcgacgtcaccctg
ctgggccagaacgtcaattcctacgggcatgacctcgacccggcggcggacctggcggat
ctcctgaccgcggccgccgcggtgccgggcatccgctgggtgcgctaccttacctcgcac
cccaaggatttctcgtcccggcttattgccgccatcgccggggacccccgcatcacccgc
cacctgcatctgccggtgcaatcgggcagcaccccggtgctgaagcgcatgaaccgcaag
tacacggctgaacagtaccgcgacctggtggcccgcatccgggccgccatcccggacgtg
gtcctcaccaccgacatcatcgtcggctttccgggggagacggaggcggactttgccgcc
accctggacctggtacgcgacctgcggtttgatgccgccttcaccttcctgtactcggcg
cgggcagggacgcccgccgcccgctgggaggcccgggaaccggtgcccaacccggtgaag
aaggcccgcctcaaccggttgatggagcttcagtacgccatcagcctggaggccaaccag
gcttgggtggggcggcaggaagtggtgctggtggaaggggtcagccggaagaatccgggg
gtctggagtgcccgcacccgggacaacaaggtggtcctgctggaccgggatccgggggtg
gagctggcggaccggttcgtgccggtccgcattaccggggcacgcaccttctacctgacc
ggggaagtggccggagccccgttggatgatccgctgccgccgcgggatgtggcgctgccg
ctggcctga
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