Candidatus Hydrogenisulfobacillus filiaventi: R50_1373
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Entry
R50_1373 CDS
T08923
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hfv
Candidatus Hydrogenisulfobacillus filiaventi
Brite
KEGG Orthology (KO) [BR:
hfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hfv03009
]
R50_1373 (rimO)
Enzymes [BR:
hfv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
R50_1373 (rimO)
Ribosome biogenesis [BR:
hfv03009
]
Prokaryotic type
ribosomal protein modification factors
R50_1373 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
RIM2a_ZnF
Motif
Other DBs
NCBI-ProteinID:
CAB1128879
UniProt:
A0A6F8ZFW6
LinkDB
All DBs
Position
1:complement(1282019..1283362)
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AA seq
447 aa
AA seq
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MNKGDHGGAAPLEVGMVSLGCPKNRVDSETMLGLLEEAGYRLTARAEEADVLIINTCGFI
DAAKRESVRTILEMAELKQTGRLKALVVAGCLSQRYRGELWQELPEVDAMVGTGEFGRIV
EAVEGALAGSRPAFWGDTPVRGRPSLRRLSTPAHLAYVKIAEGCDHTCAFCAIPLMRGGY
RSRPLGDIVAEVRGLAARGVREVVLVAQDTTLWGHDLYGRPALDRLLYALAEVPGILWIR
LLYSYPTQIGPGLLRAMRDLPQVAPYLDLPLQHAHSDILRAMRRPFRQGRVEEVLAAIRE
AVPDITLRTTFIVGFPGEAEEHVNALLDFVARIRFEHVGVFTYSPEEGTGAAPLGDPVPR
LVKERRRRRVLLLQRSLLPAVRGRHVGRRVPLLVEQEGEAVSIARGPMDAPDIDGVTLLR
GRWPAGTVVPARITGVDGYDLLAEAAP
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagggcgaccatggcggggcagccccgctcgaggttggcatggtaagcctcggc
tgcccgaagaaccgggtggactccgagaccatgctggggctgctggaggaggcggggtac
cggctgacagcccgggccgaggaggccgacgtcctcatcatcaacacctgcggcttcatt
gacgccgccaagcgggagtcggtgcgcaccatcctggaaatggcggagctcaagcagacc
ggccgcctgaaggcgctggtggtagccgggtgcctgtcgcagcgctaccggggggagctg
tggcaggagctgccggaagtggacgccatggtcggcacgggggagttcggccgcatcgtg
gaggcggtggagggggccttggccggcagccggccggccttctggggggataccccggtg
cggggacggccctccctgcggcggctgagcaccccggcccatctggcctatgtcaagatt
gccgagggctgtgaccacacctgcgccttctgtgccatccccctcatgcggggcggctac
cggagccggcccctgggcgacattgtcgctgaggtgcgggggctggcggcccggggcgtc
cgtgaggtggtgctggtggctcaggacaccaccctctgggggcacgacctgtatggccgg
ccggcgctggaccggctgctgtacgccctggccgaggtgcctggcatcctctggatccgg
ctgctgtacagctacccgacccagatcgggcccgggctcttgcgggcgatgcgggatctg
ccgcaggtcgcgccctacctggacctgccgttgcaacatgcccattcggacatcctccgg
gcgatgcggcggcccttccggcaggggcgggtggaggaggtgctggcggccatccgggag
gcggtgccggacatcaccctgcggaccacctttatcgtgggtttcccgggcgaggcggag
gagcatgtgaacgctctcctcgactttgtggcccggatccgcttcgagcatgtgggcgtg
ttcacctactcccccgaggagggcaccggtgccgcccctctgggggatcccgtcccgcgt
ctggtcaaagagcggcgccggcggcgggtcctgctgctgcagcgctcgctgctgccggct
gtccgcggccgccatgtggggcggcgggtccccctgctggtggagcaggagggggaggcg
gtgagcatcgcgcggggaccgatggatgcaccggacatcgacggcgtgaccctgctgcgc
ggacgctggcctgccgggacggtggtgcccgcccgcattaccggggtggacggttacgac
ctcctggcggaggcggcaccgtga
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