Candidatus Hydrogenisulfobacillus filiaventi: R50_1768
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Entry
R50_1768 CDS
T08923
Symbol
groEL
Name
(GenBank) chaperonin large subunit
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hfv
Candidatus Hydrogenisulfobacillus filiaventi
Pathway
hfv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hfv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R50_1768 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hfv03019
]
R50_1768 (groEL)
03110 Chaperones and folding catalysts [BR:
hfv03110
]
R50_1768 (groEL)
03029 Mitochondrial biogenesis [BR:
hfv03029
]
R50_1768 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hfv04147
]
R50_1768 (groEL)
Enzymes [BR:
hfv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
R50_1768 (groEL)
Messenger RNA biogenesis [BR:
hfv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
R50_1768 (groEL)
Chaperones and folding catalysts [BR:
hfv03110
]
Heat shock proteins
HSP60 / Chaperonin
R50_1768 (groEL)
Mitochondrial biogenesis [BR:
hfv03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
R50_1768 (groEL)
Exosome [BR:
hfv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
R50_1768 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
R50_1768 (groEL)
Exosomal proteins of breast cancer cells
R50_1768 (groEL)
Exosomal proteins of colorectal cancer cells
R50_1768 (groEL)
Exosomal proteins of bladder cancer cells
R50_1768 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
FtsA
Motif
Other DBs
NCBI-ProteinID:
CAB1129269
UniProt:
A0A6F8ZHW7
LinkDB
All DBs
Position
1:complement(1645009..1646628)
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AA seq
539 aa
AA seq
DB search
MAKQMVYDEEARRALERGVDKLANAVKVTLGPKGRNVVLEKKFGAPLITNDGVTIAREIE
LEDPFEALGAQLVKEVATKTQDVAGDGTTTATVLAQAMIKEGLKNVTAGANPMGIKRGIE
KAVEVAVEEIKKIAIPIKGRESITQVASISANDPEIGSLIAEAMEKVGPDGVITVEESKT
TGTTLETVEGMQFDRGYISPYMVTDTEKMEAVLSEPYILITDRKISAIQDLLPVLEKVVQ
RGKPLLIIAEDVEGEALATLVVNKLRGTLTAVAVKAPGFGDRRKAMLEDIAILTGGQVIS
EDLGIKLENVTPDMLGQARQVKVAKEETTIVEGRGSEAEIKKRIGVIKKQIEDTTSEYDK
EKLQERLAKLSGGVAVIQVGAATEVELKEKKLRIEDALSATRAAVEEGIVPGGGTSLLRI
VPALEKLNVTGDERIGVDIVRRALEEPVRQIAHNAGQEGSVIVEAVKRETGNRGYDAAAG
QFVDMVEAGIVDPAKVTRSTIQNAASIAAMLLTTEALVVDKPEKKEASVPNPGMNDMMM
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcagatggtctacgacgaggaagcccggcgcgcattggagcgcggggtggat
aagctggcgaacgcggtcaaggtcaccctgggacccaagggccgcaacgtcgtgctggag
aagaagttcggggcgccgctcatcaccaacgacggcgtgaccatcgcccgggagatcgag
ctcgaggatccctttgaggccctgggcgcccagctggtgaaggaagtggcgaccaagacc
caggacgtggcgggtgacggcaccaccacggcgaccgtgctggcgcaggccatgatcaag
gaagggctcaagaacgtcactgccggcgccaaccccatgggcatcaagcgggggattgaa
aaggcggtggaggtggcggtggaggagatcaagaagatcgccatccccatcaagggtcgc
gagtccatcacccaggtggcctccatctccgccaacgaccccgagatcggcagcctcatc
gccgaggccatggagaaggtggggccggacggggtcatcacggtggaggagtccaagacc
accggcacgaccctggaaaccgtggagggcatgcagttcgaccgcgggtacatcagcccc
tacatggtgaccgacaccgaaaagatggaggcggtgctgagcgagccgtacatcctcatc
accgaccgtaagatctcggccatccaggacctgctgcccgtgctggagaaggtggtgcag
cgcggcaagcccctgctcatcatcgccgaggacgtggagggtgaagccctggccaccctg
gtggtgaacaagctgcgcggcaccctgactgcggtggcggttaaggcccccggcttcggc
gaccggcgcaaggccatgctggaggacattgccatcctgaccggggggcaggtcatctcc
gaagacctcggcatcaagctggagaacgtgacccccgacatgctgggccaggcgcgccag
gtgaaggtggccaaggaggagaccaccatcgtcgagggccgcggttcggaggcggagatc
aagaagcgtatcggggtcatcaagaagcagattgaggacaccacctccgagtacgacaag
gagaagctgcaggagcggctggctaagctgtccggcggggtggcggttatccaggtgggt
gcggccaccgaggtggagctgaaggagaagaagctccgcatcgaggacgccctttcggcc
acccgggcggcggtggaggagggcatcgtgcccggcggcggcacctccctgctgcgcatc
gtgcccgcgctggagaagctcaacgtcaccggcgacgagcggatcggggtggacatcgtc
cgccgggcgctggaggagccggtgcggcagatcgcccacaacgccggccaggagggctcg
gtgattgtggaggcggtcaagcgcgagaccggcaaccgcggttacgacgcggcggcgggt
cagttcgtggacatggtggaggccgggattgtggaccccgccaaggtgacccgttccacc
atccagaacgcggcctccatcgcggccatgctcctcaccaccgaggcgctggtggtcgac
aagccggaaaagaaggaagcttccgtgcccaacccgggcatgaacgacatgatgatgtag
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integrated database retrieval system
