Candidatus Hydrogenisulfobacillus filiaventi: R50_2175
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Entry
R50_2175 CDS
T08923
Name
(GenBank) Cytoplasmic axial filament protein CafA and Ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
hfv
Candidatus Hydrogenisulfobacillus filiaventi
Brite
KEGG Orthology (KO) [BR:
hfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hfv03019
]
R50_2175
03009 Ribosome biogenesis [BR:
hfv03009
]
R50_2175
Messenger RNA biogenesis [BR:
hfv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
R50_2175
Ribosome biogenesis [BR:
hfv03009
]
Prokaryotic type
rRNA processing factors
R50_2175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
TRAM
RNase_E_G_Thio
KH-I_KHDC4-BBP
S1
KH_1
KH_2
Motif
Other DBs
NCBI-ProteinID:
CAB1129672
UniProt:
A0A6F8ZIA0
LinkDB
All DBs
Position
1:complement(1994141..1996114)
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AA seq
657 aa
AA seq
DB search
MTRRKRRRWGAAPASGPAAVEHEAGEEIRPETEELDSPGEPEPKTFRELLVNFEGGESRL
AILEDGQLVEFYIDRDDDDQAAGNIYKGRVENVLPGMRAAFVNLGLDKNAFLYVDDANAE
ARDRRRGQPIQEVLKVGQEVVVQVAKEPIGTKGARVTTNISLPGRYLVLTPYSETIGVSR
RIERAAERERLRALAQKLRPRGMGLIVRTVAQGASQRQLARDLAYLRRLWARIRQKARTA
KAPAVLHREASLIGRTIRDHLDESVDRFIVDDPQAYLRAREITAALSPELLNRLEYYSGE
VPLFEARGVEAELDRALKRRVWLRCGGYLVIDETEALTVIDVNTGKNVGTTDLADTVLNT
NREAAVEIARQLRLRDISGIVVIDFIDMEREEDQKEVIRTFQAALRGDRTRVTVLGLTRL
GLLELTRKKVRESLLNQLTRICPQCEGRGHVLSESVLARRFRQRILARLRESGAEAVLAE
AHPSVAAHLIGPGGSNLKELEREAGKTVFIRGSQDCALTDLRIRKLGTRAEVEALALPVR
EGERLTLTVEDRHATNPEDGIARREGYVIDVQGAGGLVGEQVAVEVTRVLRTFATARLVE
APGLPPLALPLPETAAARDEAPPARRTSGRRRGRKTPPAPEGAAPASEGPPAAPGEV
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgacacggcgtaaacgtcgccgctggggggcagcgccggcgtcgggacccgccgccgtc
gagcacgaggccggcgaggagatccggccggagacagaggagctggacagccccggcgag
cctgagccgaaaacctttcgcgagcttttggtaaatttcgagggtggcgaaagccgcctg
gcgattttggaagacgggcaactggtcgagttctacatcgaccgcgacgatgacgaccag
gcggccgggaacatctacaagggccgggtcgagaacgtgctgccggggatgcgggcggcc
tttgtcaacctggggctggacaagaacgccttcctgtatgtggatgatgccaacgccgag
gcccgggaccggcggcgggggcagccgattcaggaggtgctcaaggtcggccaggaagtg
gtggtgcaggtcgccaaggagcccatcggcaccaaaggggcccgcgtcaccaccaacatc
agtcttcccggccgttacctggtcctgaccccctactcggagaccatcggggtctcgcgg
cgcatcgaacgggcggcggagcgggaacgcctgcgggccctggcccagaagctgcggccg
cgggggatggggctgatcgtgcggacggtggcccagggggcctcccagcggcagctggcc
cgcgacctggcctacctgcgccgcctgtgggcgcggatccggcagaaggcccgcacggcc
aaagccccggctgtcctccaccgggaggccagcctcatcgggcgtaccatccgcgatcac
ctggacgagagcgtcgaccgcttcatcgtcgatgacccccaagcctatctgcgggcgcgg
gagatcaccgccgccttgtccccggagctgctgaaccggctggagtattacagcggggag
gtcccgctctttgaggcccggggggtggaggcggagctggaccgtgccttgaaacggcgg
gtctggctgcgctgcggcggctatctggtcatcgacgagaccgaggccctgaccgttatc
gacgtcaacaccggcaagaacgtggggaccaccgacctggccgacacggtgctcaacacc
aaccgcgaggcggcggtggagatcgcccgccagctgcggctgcgggacatcagcgggatc
gtggtcatcgacttcatcgatatggaacgggaggaggaccagaaggaggtcatccgcacc
ttccaggccgccctgcgcggggaccgcacccgggtgacggtgctgggcctgacccggctg
ggcctgttggagctgacccgcaagaaggtgcgggaaagcctgctcaaccagttgacccgc
atctgtccccagtgcgaaggccgcgggcacgtgctctcggagtcggtgctggcgcgccgg
ttccggcaacgcatcctcgcccgcctgcgggaaagcggggcggaggcggtgctggcggag
gctcatcccagtgtggccgcccatctcatcggcccggggggcagcaacctcaaggaactg
gaacgggaggcgggcaagaccgtcttcatccgcggttcccaggactgtgcccttaccgac
ctgcgcatccgcaagctgggtacccgcgccgaggtggaggccctggccctgcccgtccgg
gaaggcgagcgcctgaccctcacggtggaggaccgccatgccaccaatcccgaggacggc
atcgcccgtcgggaggggtatgtgatcgacgtgcagggggcgggcgggctggtgggtgag
caggtggcggtagaggtgacgcgcgttttgcgcacctttgccaccgcccgcctggtggag
gcgccgggactgccgcccctggcactgcccctgccggagacggccgcggcccgggacgag
gcgccgccggcccggcggacctccggccgccgccgcgggcgcaagacacccccggccccc
gaaggggccgcgcccgcctccgaagggccgccggcggccccgggcgaggtttga
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