Candidatus Hydrogenisulfobacillus filiaventi: R50_2423
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Entry
R50_2423 CDS
T08923
Symbol
rpoA
Name
(GenBank) RNA polymerase (alpha subunit)
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hfv
Candidatus Hydrogenisulfobacillus filiaventi
Pathway
hfv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hfv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
R50_2423 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hfv03021
]
R50_2423 (rpoA)
03400 DNA repair and recombination proteins [BR:
hfv03400
]
R50_2423 (rpoA)
Enzymes [BR:
hfv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
R50_2423 (rpoA)
Transcription machinery [BR:
hfv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
R50_2423 (rpoA)
DNA repair and recombination proteins [BR:
hfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
R50_2423 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CAB1129920
UniProt:
A0A6F8ZJZ2
LinkDB
All DBs
Position
1:complement(2212823..2213770)
Genome browser
AA seq
315 aa
AA seq
DB search
MTEIEKPEIRRVDDGSDPHYGAFTIEPLERGYGTTLGNALRRVLLSSLPGAAVTTVRIDG
VLHEFSVIPGVVEDTADIILNLKHLALKLWSDEPRVLRLEKDGPCEVVAGDIQGDADVEI
LEPDQHIATIDEGGHLAMELTVERGRGYVPADKNKRPEQAIGVIPVDSIFSPVRRVNWRV
EDTRVGQITDYDRLTLEVWTDASLTPEEAVSMGARILSEHLQLFIRLTDNVPGVEIGVER
EEDKKDRLMEMPIEELDLSVRSFNCLKRAGINTVGELAEKTDEDMMKVRNLGKKSLEEVK
EKLFALGLSLKPSEE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaatcgagaagccagaaatccgtcgcgtggacgatggcagcgatccccactac
ggggccttcaccatcgagccgctggagcggggttacggcaccaccctcggcaatgccttg
cgccgggtgctgctgtcctccctgccgggcgcggcggtgaccacggtgcggattgacggc
gtcctgcacgagttctcggtgatcccgggggtggtggaggacacggccgacatcatcctc
aacctcaagcacctggccctcaagctgtggtccgatgaaccgcgggtgctgcgcctggag
aaggacgggccctgcgaggtggtggccggcgacatccagggggacgcggatgtggagatc
ctggagccggaccagcacatcgcgaccatcgacgaaggcggccacctggccatggagctg
accgtggagcgcgggcggggctatgtcccggcggacaagaataagcgccccgaacaggcc
attggcgtgatcccggtcgactccatcttcagccccgtacgtcgcgtgaactggcgggtg
gaggacacccgggtgggtcagatcacggactacgaccgcctgaccctggaggtatggacc
gacgcctccctgaccccggaggaagcggtgtcgatgggggcgcggatcctgtccgaacac
ctgcagctgttcatccgcctcaccgacaacgtccccggggtggagatcggggtcgagcgc
gaggaggacaagaaggaccggctgatggagatgcccattgaggagctcgacctctccgtg
cgttccttcaattgcctgaagcgggccggcatcaacacggtcggggaactggccgagaag
accgatgaggacatgatgaaggtgcgcaacctgggcaagaagtcgttggaagaggtcaag
gagaagctgtttgccctgggcctgtccctgaagccgtccgaggagtag
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integrated database retrieval system
