Candidatus Hydrogenisulfobacillus filiaventi: R50_2676
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Entry
R50_2676 CDS
T08923
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hfv
Candidatus Hydrogenisulfobacillus filiaventi
Pathway
hfv03030
DNA replication
hfv03430
Mismatch repair
hfv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R50_2676
03430 Mismatch repair
R50_2676
03440 Homologous recombination
R50_2676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hfv03032
]
R50_2676
03400 DNA repair and recombination proteins [BR:
hfv03400
]
R50_2676
Enzymes [BR:
hfv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R50_2676
DNA replication proteins [BR:
hfv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R50_2676
DNA repair and recombination proteins [BR:
hfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R50_2676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_22
AAA_30
AAA_5
AAA_19
AAA_16
AAA_assoc_2
RCF1-5-like_lid
AAA_14
AAA_18
AAA_7
AAA_28
bpMoxR
AAA_11
TY-Chap3
Rad17
PIF1
Mg_chelatase
DUF815
AAA_2
ACT_6
DNA_pol3_delta
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
CAB1130165
UniProt:
A0A6F8ZL23
LinkDB
All DBs
Position
1:complement(2456225..2457817)
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AA seq
530 aa
AA seq
DB search
MAREALYRTYRPRTFGDVVGQDPVVETLRQAVLHGRLTHAYLFSGPRGTGKTSVARILAK
AVNCEAPRDGEPCLACASCRAVEQGSHLDVIEVDAASNRGIDEVRDIKERLQHAPVMGSR
KVYIIDEVHMLSQEAANALLKTLEEPPPHILFVLATTDPQKLPATVLSRCQRFAFRRLPV
SLIVSRLEGVLEREGVAFDREALETVAEAADGGLRDALSLLDQVLAMDPAGEARLATTRE
LVGSLDGTTLEQVLRAMAAADAPGLMAALEAAYAQGRDPRQILRDVARQLRDVIVYHQVG
EAALPAHRRERAAGLAAAGWRHPREPGRWFGALERLAAAEDRLRGSFPAPLVLELALFQA
MEMLSGEPPASGTATTGRPVQEAGRTERPRVAAEGPSGATAAVPAAAPGPPEGDRWERLV
AYLHRKRKLPVVSLLAEARVSEEAGTLVVTLAYPTWVEQMTGSKLAAFQEALRAAYGPEW
QVRFQPPGGESPTMEAGNPRPGDDELLRRVREVFGPEVRVEGFGPGGDAG
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgaagccctataccgcacctatcgtccccggaccttcggggacgtcgtcggg
caggatccggtagtggaaaccctgcgccaggcggtgctgcatggccgtcttacccatgcc
tacctgttttcaggacctcgaggcacgggtaagacctcagtggcccggattctggccaag
gccgtcaactgcgaggcgccccgggacggggaaccgtgtctggcctgtgcctcctgccgt
gccgtggaacagggcagccatctggatgtgattgaggttgacgctgcctccaaccgcggt
atcgacgaggtgcgggacatcaaggagcgactgcagcatgccccggtgatgggcagccgt
aaggtgtacattatcgacgaagtgcacatgctctcccaggaggcagccaatgccctcttg
aagaccttggaggagccgccgccccatatcctctttgtgctggccaccaccgatccccag
aagctgccggctacggtgctctcccgctgtcaacgcttcgctttccggcggctgccggtg
tccttgatcgtcagccggctggagggagtgctggagcgggaaggagtggcgttcgaccgg
gaggccctggagaccgtggcggaagcagccgatggtggactgcgggatgccctcagcctg
ctggatcaggtgctggccatggaccccgccggcgaggcccgtctggccaccacccgggag
ctggtgggcagcctcgacggcacaaccctcgaacaggtgctgcgggcgatggcggccgca
gatgcccccggcctgatggctgcgctggaggccgcctacgctcagggccgcgacccccgc
caaatcctgcgggatgtggcgcgccagctacgggatgtaatcgtgtatcatcaagttggg
gaagcagcgctgccggcccatcggcgggaacgggcggcaggtctggcggcagctggctgg
cggcacccgcgggagcccgggcgctggtttggcgccctggaacgtctggcggcggcggag
gatcggctgcggggttcgtttccggcgcctctagtgctggagctggccttgtttcaggcc
atggaaatgttgagcggggaaccgccggcgtcggggacagcaacaacgggccggcccgtg
caggaagccggacggacggaacggccccgcgtggcagccgagggcccttccggggcaacg
gccgcagtgccggcagccgctccgggccccccggagggtgaccgctgggagcgcctggtc
gcctatctgcatcggaagcgcaagctgccggtggtgagcttgcttgcggaagcccgtgtc
tcggaggaggcgggcaccctggtggtgaccttggcctatccgacctgggtggagcagatg
acggggtcgaagctggctgcctttcaagaggcactgcgggccgcttatggaccggagtgg
caggtacggtttcagcccccgggaggggaatccccgactatggaggcgggcaacccgcgt
ccgggggacgacgagctgctgcggcgggttcgcgaggtgttcgggcctgaggtccgggta
gagggtttcggccccggcggggacgccggatag
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