Helicobacter gastrofelis: NHP190012_00560
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Entry
NHP190012_00560 CDS
T10844
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hga Helicobacter gastrofelis
Pathway
hga03420
Nucleotide excision repair
hga03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NHP190012_00560
03430 Mismatch repair
NHP190012_00560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hga03400
]
NHP190012_00560
Enzymes [BR:
hga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NHP190012_00560
DNA repair and recombination proteins [BR:
hga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NHP190012_00560
MMR (mismatch excision repair)
Other MMR factors
NHP190012_00560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_11
Viral_helicase1
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
BCZ18414
LinkDB
All DBs
Position
57151..59145
Genome browser
AA seq
664 aa
AA seq
DB search
MGLNAEQLQATKAPLGANLVIASAGTGKTSTIVGRILHLLESGIDPKKILLLTFTNKASQ
EMKARLAQHTDKAAAIEAGTFHAIAYRYLKTFDPTLCLKQPREMQTLLKSILEQDHKTKE
DDAYGASHLYDLHSYYINAQSKESFADWLLGRNAKQADYIQRYECALELFNELKREQNYV
DYNDLLLRYKETMAQKPPAFVEVLCDEYQDTNPLQDAVLDALRPQSLFCVGDYDQSIYAF
NGADISIISNFATKYKQAQVFTLQKNYRSSRAILSLANKVIANNPRIYPKQLEVVKAANP
STPTLLQYGELFEQYKGIAAHIARRGGFEDTAILFRNNSSAEGCEAALRELGVPSRRKGG
VGFFDTKEVKLLLDTCAFLSYSKDMMATMQVLSHGSGIGNALAKDLYLALQILGDGNSLQ
GLLKPNNKNPYPQAKRPQMGLFESILPPATPTHQVSPAFKNHPLLTHPKLSQAAATFLDQ
LYTLCKTYSPKLPAHSLTHIARSAWFDNITQSLARERAKLKDGRVDEKLCESALDKIKQR
VDLLVQLATSYKGLRDFLHAMVLGSKEMASGSGVQLLSVHASKGLEFDTVYVIDLMEGRF
PNLKLAKQSGSLEEERRLFYVAVTRARDHLYLSYAKEDKMKKTAYEPSRFLIEGGLINSK
DKDY
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
gtgggtttaaacgcggagcaattacaagccaccaaagcccccttaggggcgaatttagtc
atcgcctcggcgggcacgggcaagacctccaccattgtggggcggattttacacctgcta
gaaagcggcattgaccctaagaaaattttattgctcaccttcaccaacaaggccagccaa
gaaatgaaggcaagactcgcccagcacacagacaaagccgccgccattgaagcggggacc
ttccacgccatcgcctaccgctacttaaaaacctttgaccccacgctctgcctcaaacag
cctagagaaatgcaaaccctgcttaaaagcattttagagcaggaccacaagaccaaagaa
gacgatgcctatggggcgagccacttatacgatctacactcctactacatcaacgcccaa
agtaaagagagttttgccgattggctcttggggcgcaacgccaaacaagccgactacatt
cagcgttatgagtgtgccctagagctttttaacgagcttaagagagaacaaaactatgta
gactacaacgacttgttgctgcgctacaaggaaaccatggcgcaaaagccccctgccttt
gtagaagtgctgtgcgatgaataccaagacactaaccccttgcaagacgcggttttagac
gcgttgcgcccccaaagccttttttgcgtaggcgattacgaccaaagcatttacgccttc
aatggggcggacatttctattattagcaatttcgccacgaagtacaaacaagctcaagtc
ttcaccttgcagaaaaactaccgatccagccgtgcgattttaagccttgccaataaagtc
atcgccaacaacccccgcatttaccccaagcaattggaggtggtgaaagcggctaacccc
tccaccccgacccttttgcaatatggcgagctgtttgagcaatacaagggcattgcggca
cacatcgctaggcggggggggtttgaagacacagcgattttatttagaaataactccagt
gctgaagggtgcgaggcggcactaagggagcttggcgtgccctcaaggcgcaaggggggg
gtggggttttttgacaccaaggaagtgaaattactcttggacacttgcgcttttttgagc
tactctaaggacatgatggcgaccatgcaggttttaagccatggcagcgggattggtaac
gctctagccaaagacctttatttagccctgcaaattttaggcgatggcaatagcctacaa
ggcttgttaaagcccaacaacaaaaacccctacccgcaggctaaacgcccccaaatgggc
ttgtttgaatccattctgcccccagccacccccacccaccaagtgagccctgcgtttaaa
aaccaccccctactcacccaccccaaactcagccaagccgccgccacttttttagaccaa
ctctacaccctttgcaaaacttatagccctaagttgcccgcccatagcctaacccatatt
gctaggtcggcgtggtttgacaacatcacccaaagcctagccagagagcgggcgaaactt
aaagatgggcgcgtggatgaaaaactatgcgagagcgcattagataagatcaaacaaagg
gtggatttattggtgcagcttgccacaagttataaaggtttgcgcgacttcttgcacgca
atggtcttaggctctaaagagatggcaagcggcagtggggtgcagcttttaagcgtgcat
gcgagcaaggggctggagtttgacacggtgtatgtgatcgatctgatggaggggcgcttt
cctaacctcaagctagccaaacaaagtgggagcttggaggaagagcggcggctgttttat
gtggcggtaacccgcgctagagatcatttatatttgtcctacgccaaagaggataaaatg
aaaaagaccgcttatgaaccttcgcgctttttaatcgagggggggctgataaattctaaa
gataaagattattaa
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