Helicobacter gastrofelis: NHP190012_01550
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Entry
NHP190012_01550 CDS
T10844
Symbol
uvrD
Name
(GenBank) DNA helicase II UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hga Helicobacter gastrofelis
Pathway
hga03420
Nucleotide excision repair
hga03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NHP190012_01550 (uvrD)
03430 Mismatch repair
NHP190012_01550 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hga03400
]
NHP190012_01550 (uvrD)
Enzymes [BR:
hga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NHP190012_01550 (uvrD)
DNA repair and recombination proteins [BR:
hga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NHP190012_01550 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NHP190012_01550 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
BCZ18513
LinkDB
All DBs
Position
152009..154012
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AA seq
667 aa
AA seq
DB search
MLHIDGPLLILAGAGSGKTKTLTTRLAYLIGSVGVRPENTLTLTFTKKAAHEMQERAMAL
LGTQHKPYKLKLSTFHSFGCAFLRKYMGVLGRTKDFIVKKPEELKKELKHILLPYKNNSN
FPWQDDSHFLGHLFKNFLRIKNHLIKWEDCYPDVKKAFRAYGEYLEKQNWVDYDDLIALP
HLILEETPTLARQISEYYQYISVDEYQDTNPLQFKLLKQLCSTHENLCVVGDDDQSIYGF
RGADISNILDFQNRFPRAKVIKLEQNYRSTPEILSCANELIAHNQYRHQKTLFSQKSQGG
AHTIKAKHFPNTLEEQGFILKKILECAAKGIPYEEIAILYRFNCLAEDIEKTLRQAKIPY
TLVGQTGFFERAEIKDRLAYLRTLANPHDDSALLRLLSKVKGLGKGSVEKIQCICAQNAC
SIAKAYQSHLLQGLPSKAHARLQEFFTLLDALSLQATHLSKPKQALELFNAYAYMDDGEQ
TDEEVLERLQALKTMFLDFVTESLALESCVSVQDFLDQSVLETPAIHSKNSKGVKCMTVH
ASKGLEFSVVFLVGFEEGFFPYGTKEADIEEERRLGYVAITRAKEEFYICSTKERAYFRQ
KQVNLSPSRFVEEAKLAPAPILHVGDCVHHSHYGFGLIKHIEEGHLQVFFTHGLVWLRPN
SVKKIVL
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
gtgctccatattgacggacccttattgattttagccggagcaggcagcggtaaaaccaag
actctaaccacccgcctagcttacctcatcggctctgtgggggtgcgccctgaaaacacg
ctcactttaaccttcaccaaaaaagccgcccatgaaatgcaagagagggcgatggcattg
ctcggcacacagcacaaaccttataaactcaaactcagcactttccacagctttggttgc
gcttttttgagaaaatacatgggagtgttggggcgcacaaaagactttattgtcaaaaaa
cccgaagaacttaaaaaagaactcaaacacattttgctcccctacaaaaacaatagtaat
tttccatggcaagacgattctcactttctcggtcatttatttaaaaattttttgcggatc
aaaaaccacctcatcaaatgggaagattgctaccccgatgtcaaaaaagcgtttagggct
tatggagaatatttagaaaaacaaaattgggtggattatgacgacctcatcgcactgccc
catctcatcttagaagaaacgcctacactggcgcgccaaatcagcgagtattaccaatac
atctctgtagatgagtaccaagacaccaaccccttgcaattcaaacttttaaaacaactt
tgcagcacccacgaaaacttgtgcgtggtgggtgatgacgaccaaagcatttacggcttt
aggggggcagacatcagcaatattttagactttcagaaccgattccccagagctaaggtc
atcaaactcgagcaaaattaccgctccacccctgaaatccttagctgcgcaaacgaactc
atcgcccataaccaataccgccaccaaaagaccttatttagccaaaagagccaagggggt
gcacacaccataaaagcgaagcatttcccaaacaccttagaagaacaaggctttatcctt
aaaaaaatcctagaatgcgccgctaagggaatcccctatgaggaaatcgccatcctttac
cgctttaattgccttgctgaagacattgaaaaaaccctacgccaagctaaaatcccctac
actcttgtgggacagacgggcttttttgagcgcgccgaaattaaagaccgcctcgcctat
ttgcgcacgctggctaacccccatgacgacagcgcacttttgcgcttgcttagcaaagtt
aaagggttgggcaagggtagtgtagaaaaaatccaatgcatttgcgcgcaaaatgcttgt
agcatcgctaaggcttatcaatcccatttgctccaaggactccccagtaaagcccatgct
cgcttacaagagtttttcacccttttagatgccctatccctccaagccacgcacctaagc
aaacctaagcaagctctagagctttttaacgcctacgcctacatggacgatggagaacaa
acagatgaggaagttttagaacgcttacaagctttaaaaaccatgtttttagactttgtg
actgaatctttagcattagagagctgtgtatccgtgcaagattttttagaccagagcgtg
ttagaaactccagccatccattcaaaaaattctaagggggtcaagtgcatgaccgtgcat
gcctctaaaggtttggagtttagcgtggtttttctcgtgggctttgaagagggctttttc
ccctatggcacaaaggaggcggacattgaagaagagcgccgtttaggctatgtcgccatc
acaagagcgaaggaagaattttatatttgtagcactaaagagcgcgcgtattttaggcaa
aagcaagtcaatttgagcccatcccgttttgtggaagaagccaaattagcccccgccccc
attctacatgtgggcgattgcgtgcaccactcccactatggctttggcttgattaaacac
attgaagaggggcacttgcaagtcttcttcacgcatggacttgtgtggcttagaccaaac
tctgttaaaaagatcgtgctttga
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