Helicobacter gastrofelis: NHP190012_04270
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Entry
NHP190012_04270 CDS
T10844
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hga Helicobacter gastrofelis
Brite
KEGG Orthology (KO) [BR:
hga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hga03016
]
NHP190012_04270 (truD)
Enzymes [BR:
hga01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
NHP190012_04270 (truD)
Transfer RNA biogenesis [BR:
hga03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NHP190012_04270 (truD)
Prokaryotic type
NHP190012_04270 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
wHTH-PRTase_assc
Motif
Other DBs
NCBI-ProteinID:
BCZ18785
LinkDB
All DBs
Position
410939..412069
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AA seq
376 aa
AA seq
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MLQIMVYNARMQNENQLPRFFSANHAPIDFYFKKCARDFVVQEEPLYAFSQSGEHLIVHV
RKKDKSTWEMLGLLSQVLGCKMSVFGYAGLKDKNALTFQYISMPKTYEKALSQHAQTLYA
QGIKILDTTAHTHKIRLGHLKGNHFSLRLKKLTPLSAQKIAEVLEILQEKGFLNYFGAQR
FGKRGDNFKHATTGKKKLDKFLLSSQQSYYFNQWLSARARLNAFINNFSPLEIAKEYPKI
PLEQAKALKAQPQDFKLLEGDVLCHYPFGKYFFHTAKDLDTNLERWQAKSLVVTGLLPGF
KVLEARDLAGAFEEPFKKSINSCGDRRFALVYPSAVDFLYLPQEAQGQLKFFLPKGAYAT
IFLEEIAHQELFSSDV
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgctccaaattatggtgtataatgcccgcatgcaaaatgaaaaccaactcccccgcttt
ttcagcgcaaaccatgcgcccattgacttttactttaagaagtgcgcccgcgatttcgta
gtgcaagaagaacccttgtatgcctttagccaaagcggggagcatttaatcgtccatgtc
cgtaagaaagacaagagcacttgggaaatgttaggcctgctctcgcaagtgctgggctgc
aagatgtcggtttttggctacgcggggcttaaagataaaaacgccctcactttccaatat
atctccatgccaaagacctatgaaaaagccctatcgcagcacgcccaaaccctctatgcg
cagggcataaaaattctagacaccaccgcccacacacataaaatccgcctagggcattta
aagggcaatcattttagtttacgccttaaaaagctcacccccctaagcgcccagaaaatc
gccgaagtgttggagattttgcaagaaaaggggtttttaaactactttggggcacaacgc
tttggcaaaaggggggataatttcaagcacgccaccacgggcaagaaaaagcttgataaa
tttttactctccagccagcaaagttattatttcaatcagtggctaagcgcaagggcgcgc
ttaaacgcctttatcaataactttagccctcttgagatcgctaaagagtatcctaaaatc
cccctagagcaagctaaagccctcaaagcccagccccaagacttcaaactcttagagggc
gatgtgctctgccactacccctttggcaagtattttttccacactgctaaggatttagac
acgaatttagaaaggtggcaggctaaaagccttgtggtaacagggttactgcccggcttt
aaagtcttggaagcgagggatttagccggggcgtttgaagagccttttaaaaaatctatc
aattcttgcggggatcggcggtttgcgcttgtctaccctagtgcagtggattttttatac
ctgccccaagaagcgcaggggcaactcaagttttttctccccaagggggcgtatgctacg
atttttttagaagagatcgcccaccaagagttgtttagctccgatgtttga
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