Helicobacter gastrofelis: NHP190012_06350
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Entry
NHP190012_06350 CDS
T10844
Name
(GenBank) O-antigen polymerase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
hga Helicobacter gastrofelis
Pathway
hga00540
Lipopolysaccharide biosynthesis
hga01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hga00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NHP190012_06350
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hga01005
]
NHP190012_06350
Enzymes [BR:
hga01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
NHP190012_06350
Lipopolysaccharide biosynthesis proteins [BR:
hga01005
]
Core region
NHP190012_06350
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Cyt_bd_oxida_II
DUF6594
Motif
Other DBs
NCBI-ProteinID:
BCZ18993
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All DBs
Position
595322..596581
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AA seq
419 aa
AA seq
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MWLSLDRHKLATLFFSLFFILSFKKPSPQILMVVLAVGALLYYKAYKPPLQLKPFKWLIA
SMLAMFLVVLPNLFVGEDLEAWHYNLRSLNMPLVYVLGVVAIVCLSSTQVRLNTKILFYS
MAFACFFNGGFALVQKVFLDMARVMGFSTIVGFVTLTSMALFGCFIYALQTDKRQEKRLF
SAAMLCGFLVVLFSATRSALIAFVVTFLALCFFLRRTKKWRYMGFMALCFGGLFLLNQAL
EQHALLHAARTKDESFSQDLQLYAQKNPDSSIGARLARWQEALAIAKLSPLIGMSLSTKC
KRLDEILSLSHSYRKASEIDCREKYDNEFFNTLAHRGVLGLVALLWFLCVLWRFFAKRKD
NIGVFICAMLVFYIVLGIGFDPFDFFIEGSFFVGMVVMGAIAKQLPAEQLLATTSKDPV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtggctctcactcgatcgccacaagctagcgaccctctttttctccctttttttcatc
ctttcttttaaaaagccaagcccccaaattttaatggtggtgctggcagtgggagcccta
ctctactacaaggcctacaaacccccgttgcaactaaaaccctttaaatggctcatcgcc
tccatgctcgccatgttcttggtggtgttgcccaacttatttgtgggtgaagatttggaa
gcgtggcattacaatttgcgctctttaaacatgcccctagtctatgtgctgggtgtggtt
gcgattgtttgcctaagcagcacccaagtgcgcctcaacaccaaaattttattttacagc
atggcctttgcctgttttttcaatggggggtttgcgctcgtgcaaaaggtctttttagac
atggcacgggtgatgggctttagcacgattgtgggctttgtaacgctcacttctatggcg
ctttttggctgctttatctacgccttgcagacagacaaacgccaagaaaaacggctcttt
agcgctgccatgctttgtgggtttttggtggtgctctttagcgccactagaagtgccttg
atcgcctttgtggttacttttttagccctctgcttcttcttaaggcgcaccaagaaatgg
cgctacatggggtttatggcgctgtgctttggggggttattcttgttaaaccaagcccta
gagcagcacgcccttttacatgcagcaaggaccaaagacgagagctttagccaagacctg
caactctatgcccaaaaaaaccccgattcgagcattggtgcgcgccttgcccgctggcaa
gaagccctagctatcgctaagctctcgccccttattggcatgagccttagcacgaagtgc
aaacgcctagatgagattttgagcctctcccactcttatagaaaagcgagtgaaatcgat
tgtcgggaaaaatacgacaatgagtttttcaacaccctagcgcataggggggtcttgggg
ctagtggcgttgttgtggtttttatgcgtgctgtggcgcttttttgccaagagaaaagac
aacatcggggtgttcatctgcgccatgctggtcttttatattgtcttggggatcggtttt
gacccctttgattttttcattgagggcagcttttttgtggggatggtggttatgggagca
atcgcaaagcaattgcccgcagagcaactgcttgccacaacgagcaaagacccagtctag
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