Helicobacter gastrofelis: NHP190012_08720
Help
Entry
NHP190012_08720 CDS
T10844
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase Pnp
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hga Helicobacter gastrofelis
Pathway
hga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NHP190012_08720 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hga03019
]
NHP190012_08720 (pnp)
03016 Transfer RNA biogenesis [BR:
hga03016
]
NHP190012_08720 (pnp)
Enzymes [BR:
hga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NHP190012_08720 (pnp)
Messenger RNA biogenesis [BR:
hga03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NHP190012_08720 (pnp)
Transfer RNA biogenesis [BR:
hga03016
]
Prokaryotic type
tRNA degradation factors
NHP190012_08720 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
KH_1
RNase_PH_C
S1
PNPase
KH_N4BP1_2nd
S1_2
KH_N4BP1_1st
KH_Vigilin
Phos_pyr_kin
Motif
Other DBs
NCBI-ProteinID:
BCZ19230
LinkDB
All DBs
Position
845581..847563
Genome browser
AA seq
660 aa
AA seq
DB search
MQKININHEEFILDYMARQATSALLYRHKDTTILASVVVDLQATEEDFLPLSVQYAQRAY
AVGRLPGSFTRREGKMEDFETLTSRLIDRSLRPLFPKNYAYSTQITLLLLSHAYESDLQV
CALNAASCALYLANVGVEETIHAMRLKEKGDLFVAGSADKILMIEMQASEASDPLSEAQL
LDLLKNAHAHIKTQCALYTEHFSPHRKAKLQIPEEKPLNPHLMQILSTRFRPQILETMSL
MAKSERGAQLEHLLEYIAHELGEHCLTELKHALHACFKELLHQSILEHQERADGRGLKQI
RPIRIDTNLLPTCHSSVFFERGHTQALVTCTLGAEGDAKQNFGLQEASPTKERFMLHYNF
LPFSVGEAAPLSAPSRRELGHGHLAQKALSCSLPQNAPVIRLVSEILESNGSSSMASVCA
GSLALKASGIEPTALVAGVAMGLVFDGNKHAILSDISALEDMQGDMDFKIAGTTQGVVAM
QMDTKLAGLPLEWLEEILEQAKEARLAVLEHMQEAAQNMAINTNLPTTKSFHIPAQKMSA
LIGPGGKHIKDILQRFCVQIDLDKASGLVTVRGMQEAVTQAKEYISQALQLQNLSVGQKV
QAFVKRVVDFGVFVRLEAGEDALLHKSNAGDLDLTSLENGTPLWCEISKIEQGKVHVILA
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaattaacattaatcatgaagaatttattttagattacatggcgcgccaggcc
acgagtgcgctgctttatcgccacaaggacaccacgattttagccagcgtggtggtggat
ttgcaagccacagaggaggactttttgcccctcagcgtgcaatatgcccaaagggcttat
gctgtgggcagactgccgggcagtttcacccgccgcgagggcaagatggaggactttgaa
accctaacctcacggctcattgaccgctctttgcgccccctttttcctaagaactacgcc
tactccacgcaaatcacgctcttgcttttaagccacgcctatgagagcgatttacaggtg
tgcgctttaaacgccgcttcttgtgcactctacttagccaatgtgggcgtggaagaaacg
attcatgccatgcgcctcaaagaaaaaggcgacctttttgtggcgggcagtgcggataaa
atcttaatgatcgaaatgcaagcaagcgaggcgagcgaccccttaagcgaggcacagctt
ttagatttgttaaaaaacgcccacgcccacattaaaacccagtgcgccctttacaccgag
cattttagcccccatagaaaagcaaaactacaaatccctgaggaaaaacccttaaatccg
catttaatgcaaattttaagcacccgctttaggccccaaatcttagaaaccatgtcctta
atggcaaagagtgagcggggcgcacaattagaacatttattagaatacatcgcccacgag
ctgggcgagcactgcctcacagagctcaaacacgccctacacgcctgctttaaagagcta
ctgcaccaaagcattttagagcaccaagagagggcggatgggcgcggcttgaaacaaatc
cgccccatacgcattgacacaaacctactccccacttgccactccagcgtgttctttgaa
agggggcacacccaagctttggtaacctgcactttgggggcagagggcgatgccaaacaa
aactttggtttacaagaggcgagccccaccaaagaacgctttatgctccactataatttt
ttaccttttagtgtgggtgaggctgccccacttagcgcacccagccgccgcgagctaggg
catgggcatttggcccaaaaggctttaagctgttctttgccccaaaatgcccccgtcatc
cgcctagtgtccgagattttagagtccaatggctctagctctatggcgagcgtgtgtgcg
ggctcgctagctttaaaggcaagcgggattgagcccaccgccttagtggcgggtgtggcg
atggggttggtgtttgatggcaataagcatgccattttaagcgacatcagcgcgctagag
gacatgcaaggcgacatggattttaaaatcgcaggcaccactcagggcgtggtcgccatg
caaatggatacgaaattagctggcttgcccctagagtggctagaagaaattttagagcag
gccaaagaagcccgcctagccgtgctggagcacatgcaagaggcggcgcagaacatggcg
atcaacacaaacctacccaccactaagagttttcacatccccgcccaaaaaatgagcgca
ctcataggtccggggggcaagcacattaaagacattttacaacgcttttgcgtgcagatc
gatttagacaaggcaagcggacttgtgacggtgaggggcatgcaagaggcagttacacag
gctaaagagtacattagccaagccttgcaactgcaaaatttgagcgtggggcagaaggtg
caggcctttgtcaaacgggtggtggattttggggtgtttgtgcgcttggaggcgggggag
gacgctttgttgcataagagcaatgcgggggatttggatttgacgagcttagaaaatggc
acgccgctgtggtgtgaaatctctaaaatcgagcagggcaaggtgcatgtcattttagct
taa
DBGET
integrated database retrieval system
