Helicobacter gastrofelis: NHP190012_10350
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Entry
NHP190012_10350 CDS
T10844
Symbol
msbA
Name
(GenBank) Multidrug resistance protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
hga Helicobacter gastrofelis
Pathway
hga02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hga00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NHP190012_10350 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hga02000
]
NHP190012_10350 (msbA)
Enzymes [BR:
hga01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
NHP190012_10350 (msbA)
Transporters [BR:
hga02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NHP190012_10350 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
ABC_membrane_2
AAA_30
nSTAND1
DEAD
AAA_21
SLFN-g3_helicase
AAA_29
AAA_22
ABC_ATPase
AAA_16
DUF87
nSTAND3
KAP_NTPase
DUF815
NACHT
MMR_HSR1
CPT
AAA_5
TsaE
Motif
Other DBs
NCBI-ProteinID:
BCZ19393
LinkDB
All DBs
Position
988782..990377
Genome browser
AA seq
531 aa
AA seq
DB search
MSSFVWIVLASIVVALSTAWGTYLVKPTLDDIFIKKDTHMLGVLPFLVIVAYLGKSGGIY
IQTYFTNFIGLDIIKNLRHKMLETMLRMEMGFFNSTHKGELISRITNDIALVRASLSNYL
AESVRELLSVIGLICVVIYQSPKLSIVGLIIMPLAAIPLSKIIKKVKKLSKANQETNARM
TARLSEIFHSVEVIKTSNGEKLELQAFQKENQAFFNLSLKSIKYAEISSPLMEFLGSIAI
ALVIYLGGLEVIRGHISVGAFFSFITALFMLYTPLKRIVRIASNFQEALVAGERIYEILE
RKPAIMDGAQTLEQPITEINFKNVSLAYKDNSAPALQDINLNLQANQIVALQGKSGSGKS
SLVNLILRLYEPTSGQITINNIPLQDLQQKSLRAQIGIVTQKVFIFSGSVAENVAYGLDI
DTARVQKCLEQAQALEFVQNLGGIEATLEEFGANLSGGQRQRIAIARALYKDASVLIFDE
ATSALDRHTEENIKQTIYSLRENRLIIIISHNPASLEMADCVYHLEGGRLI
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcgtttgtgtggattgtgctagcgtctatcgttgtggctcttagcacagcgtgg
gggacttatttagtcaaacccaccctagatgacattttcattaaaaaagacacgcatatg
cttggtgtcctgccttttttggtgattgtggcgtatttgggtaagagtgggggcatttac
atacaaacctacttcacaaatttcattggcttagacatcatcaaaaacctacgccataaa
atgctagaaaccatgttgcgtatggagatgggctttttcaacagcacccacaagggcgag
ttgatttcacgcatcaccaacgacatcgctttagttcgggcgagtttgtcaaattactta
gctgaaagcgttagagagttactcagcgtgatagggcttatttgcgtggtgatttaccaa
agccccaaactctccattgtggggctcatcatcatgcccctagcggcgatccctttaagc
aaaatcattaaaaaagtgaaaaaactctccaaagcaaaccaagaaaccaacgcccgcatg
accgctagattgtccgagattttccacagcgtcgaggtgattaaaacttctaatggcgaa
aagctagagttgcaagcctttcaaaaagaaaaccaagccttctttaacttgagcctaaag
agcattaaatacgccgaaatctccagccccttaatggagtttttgggctccatcgccatt
gctttagtgatttatctaggcggtttggaggtgattagggggcatattagcgtgggagcg
tttttctctttcatcactgcccttttcatgctctacacccccttaaagcggatcgtaagg
atcgcgtctaattttcaagaggcgttggtggcaggggagaggatttacgagattttagag
agaaaacccgctattatggatggggcacagactttagagcaacccattacagaaattaac
ttcaaaaatgtcagccttgcttataaagacaactccgccccagccttgcaagacattaac
ctaaacctacaggctaaccaaattgtcgccctgcagggcaagagtgggagcggtaaaagc
tctttggtgaatctcattttacgcctatacgagcccacaagcgggcaaatcaccatcaac
aacatccccttacaagacttgcaacaaaagagtctaagggcacaaataggcattgttacc
caaaaagtctttatcttcagcggttcagtcgccgagaatgtcgcttatgggctagacatt
gacacggctagggtgcaaaaatgcctagagcaggcacaggcgttagagttcgtgcagaat
ttgggcgggattgaagccaccttagaggagtttggggcgaatttgagcggggggcaacgc
caaaggattgccattgcacgggcgttatacaaagacgcaagcgtccttatttttgacgaa
gccacttctgcccttgatcgccacaccgaagagaacattaaacaaaccatttacagccta
agagaaaaccgcctcatcatcatcatctcccataaccccgctagcctagaaatggcagat
tgcgtctatcacttggaggggggtcgattaatttaa
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