Helicobacter gastrofelis: NHP190012_14820
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Entry
NHP190012_14820 CDS
T10844
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hga Helicobacter gastrofelis
Pathway
hga03030
DNA replication
hga03430
Mismatch repair
hga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NHP190012_14820 (dnaE)
03430 Mismatch repair
NHP190012_14820 (dnaE)
03440 Homologous recombination
NHP190012_14820 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hga03032
]
NHP190012_14820 (dnaE)
03400 DNA repair and recombination proteins [BR:
hga03400
]
NHP190012_14820 (dnaE)
Enzymes [BR:
hga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NHP190012_14820 (dnaE)
DNA replication proteins [BR:
hga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NHP190012_14820 (dnaE)
DNA repair and recombination proteins [BR:
hga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NHP190012_14820 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
PIN
zf-C2H2_fungi_2
Motif
Other DBs
NCBI-ProteinID:
BCZ19840
UniProt:
A0ABM7SQA5
LinkDB
All DBs
Position
complement(1398851..1402459)
Genome browser
AA seq
1202 aa
AA seq
DB search
MQNYTHLHLHTEYSLLDGANKIKVLVKKIKELGMTSVSMTDHGNMFGAIDFYTCMKKEGI
KPIIGIETYLHNAEKLNDKQSRQRFHLCLYAKDLEGYQNLMYLSSQAFLEGFYYYPRINK
KILRERARGLICSSACLQGEINWHLNNQNPRNKKFGAKGYEEAKRIALEYQDIFGDDFYM
EIMRHGIADQLAIDEQVIRLSKETGIKLIATNDTHYTNKEDASAQEVAMCVAMGKTLNDT
ERLKHSVHEFYIKTPEEMARLFADIPEALAHTQEIADKCHLEIDLKNDTNPPTPPRFKFT
KEYAQNEGLDFEDDKAYFAHKAREGLKKRLEIVEPSLHAKYTERLEYEIKTISDMKFAGY
MLIVWDFIRHARESNIPVGPGRGSAAGSLVAFCLQITDIDPLKYDLLFERFLNPERVSMP
DIDTDFCQRRRGEMLDYMIAKYGKYNVAQVITFNKMLAKGVIRDVARVLDMPYKQADEMA
KLIPNRLGISLQEAFELEPKIQALIERNPLAKQVWDFSLRLENLNRSAGKHAAALVVDSE
RELWYKSPLYTSERTGGIVTQYSMKYLEAIDLIKFDFLGLKTLTVIHDALKVIEKYSHKK
IDFLSVDMDDPKVYATIQEGNTVGIFQIESGMFQTLNKRLRPSSFEDIIAIIALGRPGPM
ESGMVDDFVNRKHGSAPITYMFDALEPILRPTYGTIVYQEQVMQIVQTIAGFSLGEADLI
RRAMGKKDAQIMADNKAKFVQGAIKNNFDSQKAGELFDLIVKFAGYGFNKSHSAAYAMLT
FQTAYLKTHYKHEFMAAMLSSECRHIESVAYYVEEASSMGIKVERPHVNTSDVQFKVEDQ
KGEKVIVFGLEAIKGAGEGPLGTLVEIREKHGNFTSLEDLISKIDFSKFSKRILEPLVKS
GSLDGLGYNRRTMLENLDAICDEGRRKDKSNAQMSVGLFANMSSEQLEKAHLDLVELPEY
DASTLLNYEYECMGLYFSGHPLDAFKDEIKGLKNVAKSVDIARMEIGASAVFIGKVLDVK
RKIGKNSGKPYGEAAIVDFSGRFELMLFEKQLNALDQLDTELPLAFKCKIEEQEEVARLR
LLEIDTFENIKKAKIPRVRYKVQKEDTEDTQPVDIVKDFSDNPSSCVIGHQDEQHIPLSI
VLDTSVSLDLFSKLKEAAASHKGNRALSVVFYEQNKRLRFNTAFKVNTTIKENFKTYQWL
DN
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaactacacccacctacacctgcacaccgaatattctctgctcgatggcgcaaat
aaaatcaaggttttagtcaaaaagatcaaagagctgggcatgaccagtgtgagcatgacc
gatcatggcaacatgtttggtgcgatcgacttttacacttgcatgaaaaaagaggggatc
aagcccatcattggcattgaaacctacctacacaacgccgaaaagttaaacgacaaacaa
tcccgccagcgcttccacttgtgcctatacgccaaagatttagagggctaccaaaatctc
atgtatttgagctctcaagcttttttagaggggttttactactacccccgtatcaataag
aaaatcttaagagaaagagctagggggctgatttgctcgagtgcatgcttacaaggcgag
atcaactggcatttaaacaaccaaaacccccgtaacaaaaaattcggtgcaaagggctat
gaggaggctaaacgcattgccctagaataccaagacattttcggggacgatttttatatg
gagatcatgcgccatggcattgccgaccaactcgccattgacgaacaggtgattaggctc
tccaaagaaacgggcattaagcttatcgccaccaacgacacccactacaccaacaaagag
gacgccagtgcgcaagaagttgctatgtgtgtggcgatgggcaagaccctaaatgacacc
gaacgactcaaacactccgtgcatgagttttacattaaaacccccgaagaaatggctagg
ctctttgccgacatccccgaagccctcgcacacacgcaagagatcgccgacaaatgccat
ttagagatcgatcttaagaacgacaccaacccccccacccccccccgctttaaattcacc
aaagaatacgcccaaaacgaaggattagactttgaggacgataaagcctacttcgcccac
aaggcaagagaggggcttaaaaaacgcctagagatcgtagaacctagcttgcacgccaaa
tacacagaacggctagaatacgagatcaaaaccatcagcgacatgaagtttgcaggctac
atgctgattgtgtgggattttatccgccacgccagagagagcaatatccctgtgggtccg
gggcgtgggagtgcggcgggcagtttggtcgccttttgtttgcaaatcacggacattgat
ccactcaaatacgatttactctttgagcggttcttaaaccccgagcgggtgagcatgccc
gatattgataccgacttttgccaaaggcggcggggcgaaatgttggattacatgatcgcc
aaatacggcaaatacaatgtcgcccaagtgatcacctttaataaaatgctggctaagggg
gtgatccgcgatgtcgcaagggtgctagacatgccctacaaacaagccgatgaaatggca
aagctgatccctaatcgcttaggtattagcttgcaagaagccttcgagctagagcctaaa
atccaagccttgatcgagaggaacccccttgccaagcaggtttgggatttttccttgcgt
ttggaaaatttgaatcgctcggcaggcaagcacgccgccgcgttggtggtggatagcgaa
agggagctttggtataaatcccccctttacacgagtgagcgcacaggtggcattgtaacg
caatattccatgaaatacctagaggcgatcgacttaatcaagtttgactttttggggcta
aagacgctcacggtgatccacgatgccctaaaggtcattgaaaaatacagccacaaaaag
atcgactttttgagtgtggatatggacgatccgaaagtctatgccacgatccaagagggc
aacacggtggggatcttccaaatcgagtcgggcatgttccaaaccttaaacaaacggcta
cgcccttctagttttgaagacatcattgcgatcattgcgctgggtcgccccggtcctatg
gagtctggcatggtcgatgactttgtcaaccgcaaacatggcagtgccccgatcacctac
atgtttgacgcactagagcccattttacgccccacttacggcacgatcgtgtatcaagag
caagtcatgcaaatcgtgcaaaccattgcgggcttttctttgggggaggcggatttgatc
cgccgggcgatgggtaagaaggatgcacaaatcatggcggacaataaagccaaattcgtg
caaggggcgatcaaaaataattttgacagccaaaaggcgggcgagttgtttgatttgatt
gtgaaatttgccggctatgggttcaacaagtcccactccgccgcctatgccatgcttacc
ttccaaaccgcctatttaaaaacccactacaagcacgagttcatggcggcgatgcttagc
agcgaatgccgccacattgaatcggtggcttactatgtggaagaggcgagctctatgggg
atcaaagtggaacgcccccatgtcaatacctccgatgtgcaattcaaagtagaggatcaa
aagggcgaaaaagtcattgtctttgggctggaggcgatcaagggggcgggcgaggggcca
ctaggcactttggtggagatccgcgaaaaacatggcaattttacgagtttagaggatttg
attagcaaaatcgacttttcaaagtttagcaaacgcattttagagcccttggtgaaatca
ggcagcttagacgggctgggctacaaccgccgcaccatgctagaaaacttagacgcgatt
tgcgatgaggggcgtaggaaggataagagcaacgcgcagatgagcgtggggttgtttgcc
aacatgtctagcgaacagctagaaaaggcacatttagacttggtggagttgcccgaatac
gatgccagcacgctgttaaactacgaatacgaatgcatggggctttacttctcaggccac
cctttagacgcattcaaagacgagattaaaggccttaaaaatgtggctaagagcgtggat
attgcacgcatggagatcggcgcatcagcggtgtttatcggcaaggttttagatgtcaag
cgtaaaataggcaagaacagtggcaagccctatggcgaggcggcgatcgtggatttctca
ggccgctttgagctcatgctgtttgaaaaacaactaaatgccctagatcaactggataca
gaattgcccctagcctttaaatgcaagatcgaggagcaagaggaagtcgcccgcttgcgt
cttttggagatcgacacctttgaaaatatcaaaaaagccaaaatcccaagagtacgctac
aaagtccaaaaagaggacacggaggacacacagcccgtagatattgtcaaggattttagc
gacaacccgagctcttgcgtgatcgggcatcaagacgagcagcacatccccctatccatc
gtgctagacacaagcgtgtctttagatttgttttctaagctcaaagaggcggccgcaagc
cacaagggcaaccgcgccctctctgtggtcttttacgaacaaaacaaacgcctgcgcttc
aacaccgcctttaaagtcaacaccacgattaaagaaaattttaaaacctaccaatggctg
gataattaa
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