Haloferax gibbonsii: ABY42_00185
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Entry
ABY42_00185 CDS
T04025
Name
(GenBank) helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hgi
Haloferax gibbonsii
Pathway
hgi03022
Basal transcription factors
hgi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ABY42_00185
09124 Replication and repair
03420 Nucleotide excision repair
ABY42_00185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hgi03021
]
ABY42_00185
03036 Chromosome and associated proteins [BR:
hgi03036
]
ABY42_00185
03400 DNA repair and recombination proteins [BR:
hgi03400
]
ABY42_00185
Enzymes [BR:
hgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
ABY42_00185
Transcription machinery [BR:
hgi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ABY42_00185
Chromosome and associated proteins [BR:
hgi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
ABY42_00185
DNA repair and recombination proteins [BR:
hgi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ABY42_00185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
ATPase
nSTAND3
AAA_25
AAA_16
AAA_22
AAA_34
TrwB_AAD_bind
SecA_DEAD
Latarcin
T2SSE
HBB
PhoH
Sigma54_activat
AAA_7
Asparaginase_C
Motif
Other DBs
NCBI-ProteinID:
AKU06236
UniProt:
A0A0K1IP57
LinkDB
All DBs
Position
complement(37602..39806)
Genome browser
AA seq
734 aa
AA seq
DB search
MAHANGAPDDGDADGAWRFFPYDEPYPNQEAAMSGIADALDDERNVLLEGATGTGKTISA
LVPALSYAREHDKTVVITTNVHQQMRQFVEDARAITREEAIRAVVFRGKSSMCHIDVGFQ
ECQTLRDTTRSIVEKESDRAELSEQAQSLLDGMREGESGAADARSAVTDELDSIDDELEE
LKEGNYCEHYYNNLARNTDEFFQWLFDDVRTPDEIFEYAGKQNLCGYELLKEGMEGIDLV
VCNYHHLLDPMIREQFFRWLDRDPDDVITVFDEAHNIESAARDHASRALTENTLESAMNE
LEDEDDSRAESARNVIGTFLDSLRDSYEEAFGFGEREQVDENWYDLSIANQGRRDDLTME
FLQSYEGRGIDVEVELALQLGKQLDEQYEDAYKNGEATTRKECQTLQAANFIADWTEMGG
ELGRHPMLSVRRDGGTDEIYGRAELYTCIPREVTKELFEEVHASILMSATLRPFDVTEGT
LGLKNPVTMAYGLEYPEENRRTFSVSLPALFSSERDDPGTQETIEGMLADAATFTPGNTL
VFFPSYAEAERYHERLRANPDVDAELFLDEPGVRAEELRREFVGKNGAVLLTSLWGTLAE
GVSFDGDDARTVVVVGVPYPHLSERLEAVQDAYDRAYRGKKDAGWRYAVEIPTIRKTRQA
LGRVIRAPDDFGVRVLADKRYTRESSSMGKYGVRGSFPVEERAEMVDIAPNKLKFAMLNF
YNDRDAYDGDPPRP
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
gtggcccacgccaacggcgcacccgacgacggcgacgcggacggagcgtggcggttcttc
ccgtacgacgagccgtaccccaatcaggaggcggcgatgtccggcatcgccgacgccctc
gacgacgagcggaacgtcctcctcgaaggggcgaccgggaccgggaagaccatctccgcg
ctcgtgcccgcgctctcgtacgcccgcgagcacgacaagacggtcgtcatcacgacgaac
gtccaccagcagatgcgccagttcgtcgaggacgcccgcgccatcaccagagaggaggct
atccgggcggtggtgttccgcgggaagtcctcgatgtgccacatcgacgtgggctttcag
gagtgtcagaccctccgcgatacgacccggagcatcgtcgaaaaggagtccgacagggca
gaactctccgagcaggcgcagtcgctcctcgacgggatgcgcgagggcgagtccggcgcg
gccgacgcgcggagcgccgtcacggacgaactcgacagcatcgacgacgagctggaggag
ttgaaggagggcaactactgcgagcactactacaacaacctcgcgcggaacaccgacgag
ttcttccagtggctgttcgacgacgtgcggacgcccgacgagattttcgagtacgccggg
aagcagaacctctgcggctacgagctactcaaggagggcatggagggcatcgacctcgtc
gtctgcaactaccaccacctgctcgacccgatgatacgcgagcagttcttccggtggttg
gaccgcgaccccgacgacgtgattacggtgttcgacgaggcgcacaacatcgagagcgcg
gcccgcgaccacgccagtcgcgcgctcaccgagaacacgctcgagagcgcgatgaacgag
ctggaagacgaagacgactcgcgggccgagagcgcccgcaacgtcatcgggacgttcctc
gactcgcttcgcgacagctacgaggaggcgttcggcttcggcgagcgcgagcaggtcgac
gagaactggtacgacctctctatcgccaatcagggccgccgagacgacctgacgatggag
ttcctgcagtcctacgagggccgcggcatcgacgtggaagtcgaactcgcgctccagttg
ggcaagcagttggacgagcagtacgaagacgcgtacaagaacggcgaggcgacgacgcgc
aaggagtgccagacgctacaggcggcgaacttcatcgccgactggacggagatgggcggc
gaactcggccgccatccgatgctgtcggtccgccgcgacggcggcaccgacgagatttac
ggccgcgcagagctgtacacctgcatcccgagagaggtcacgaaagagctgttcgaggaa
gttcacgcgagcatcctgatgtcggcgacgctccgcccgttcgacgtgacggaggggacc
ctcgggctcaaaaaccccgtcacgatggcctacggcctcgaataccccgaggagaaccga
cggacgttttcggtctcgctgcccgcgctgttctcttccgagcgcgacgaccccggcacg
caggagaccatcgaggggatgctggccgacgccgccacgttcacgccgggcaacacgctc
gtgttcttcccgtcgtacgccgaggcggagcgctaccacgagcgtctgcgggcgaacccg
gacgtcgacgcggaactgttcttggacgaaccgggcgtccgcgccgaggagctgcgccgc
gagttcgtcggcaagaacggcgcggtgcttctcacctcgctttgggggacgctcgccgag
ggcgtgagcttcgacggcgacgacgcccggacggtcgtggtcgtcggcgttccctacccg
catctctccgagcgactggaggcggtacaggacgcctacgaccgcgcctaccgcggtaag
aaggacgccggctggcgctacgccgtcgagattccgacgattcggaagaccagacaggcg
ctcgggcgagtcatccgcgcgcccgacgacttcggcgtccgcgtgctggccgacaaacgc
tacacccgcgagagctcctcgatgggcaagtacggcgtccgcgggtcgttcccggtcgaa
gagcgcgccgagatggtcgacatcgcgccgaacaagctcaagttcgcgatgctgaacttc
tacaacgaccgcgacgcctacgacggcgacccgccgcggccctga
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