KEGG   Haloferax gibbonsii: ABY42_00720
Entry
ABY42_00720       CDS       T04025                                 
Name
(GenBank) replication factor C small subunit 2
  KO
K04801  replication factor C small subunit
Organism
hgi  Haloferax gibbonsii
Pathway
hgi03030  DNA replication
Brite
KEGG Orthology (KO) [BR:hgi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ABY42_00720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hgi03032]
    ABY42_00720
DNA replication proteins [BR:hgi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     ABY42_00720
SSDB
Motif
Pfam: AAA DNA_pol3_delta2 AAA_22 AAA_16 Rep_fac_C AAA_14 nSTAND3 DNAX_ATPase_lid Sigma54_activat AAA_11 AAA_5 AAA_33 AAA_24 DEAD RCF1-5-like_lid NACHT AAA_18 AAA_30 IstB_IS21 AAA_2 AAA_19 NPHP3_N Rad17 GUN4_N AAA_28 Viral_helicase1 RNA_helicase Mg_chelatase ABC_tran bpMoxR Lipase_3
Other DBs
NCBI-ProteinID: AKU06335
UniProt: A0A0K1IPV6
LinkDB
Position
139472..140497
AA seq 341 aa
MDAPLWTETHAPGLEDLPQPEVRERLRRAVDEPMNLVVQGPPGVGKTAAVRALAREAHSD
PENDLIELNVADFFNRTKKQIRADPRFEQFLDGRSRMAKRDMINRVLKESASYAPMSGEY
KTIVLDNAESIREDFQQALRRVMEQHHRTTQFVITTRQPSKLIPPIRSRCFPVPMPAPDD
DTLETLLADILDAEGVDYDDGGLQFLTDASNGNVRKAILSAQRTATEADEVTMSTVHAAL
GDVGFDDELKTLLINAREGDIKDARETLTTLLDDEGYEGQELLRDILRVADSTPERFADG
ELARLHVLAGQVDLDISTGIDDRLHITHLLTSWGADVRGEA
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggacgcgccgctgtggaccgagacgcacgcgccggggctcgaagacctcccacagccg
gaggtccgcgaacgcctccgacgcgccgtggacgaaccgatgaacctcgtcgtgcagggc
ccgccgggcgtcggcaagaccgccgccgttcgcgcgctggctcgcgaggcgcattcggac
cccgaaaacgacctcatcgaactcaacgtcgcggacttcttcaaccggacgaaaaagcag
attcgcgccgacccgcggttcgagcagttcctcgacggccgcagtcgcatggcgaaacgc
gacatgataaaccgcgtgctgaaggagtccgccagctacgccccgatgtccggcgagtac
aagaccatcgtcctcgacaacgccgaatccatccgcgaggacttccagcaggcgctccgc
cgcgtgatggaacagcaccaccggaccacgcagttcgtcatcaccacccgccagccctcg
aagctcatcccgccgattcgctcgcggtgtttcccggttcccatgcccgcgccggacgac
gacaccctcgaaaccctcctcgccgacatcctcgacgccgagggcgtcgactacgacgac
ggcggcctccagttcctcaccgacgcctctaacgggaacgtccgcaaggccatcctctcg
gcccagcggacggccaccgaagccgacgaggtcacgatgtccacggtccacgccgccctc
ggcgacgtgggcttcgacgacgagctgaagacgctcctcatcaacgcccgcgagggcgac
atcaaggacgcccgcgagaccctcacgacgctcctcgacgacgagggctacgagggacag
gagctcctccgcgacatcctccgcgtcgccgactcgactcccgagcgcttcgcagacggc
gaactcgcccgcctgcacgtcctcgccgggcaggtcgacctcgacatctcgacgggtatc
gacgaccgcctgcacatcacccacctcctcacgagttggggcgcggacgtccgcggcgag
gcataa

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