KEGG   Haloferax gibbonsii: ABY42_00845
Entry
ABY42_00845       CDS       T04025                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
hgi  Haloferax gibbonsii
Pathway
hgi03030  DNA replication
hgi03410  Base excision repair
hgi03420  Nucleotide excision repair
hgi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hgi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ABY42_00845
   03410 Base excision repair
    ABY42_00845
   03420 Nucleotide excision repair
    ABY42_00845
   03430 Mismatch repair
    ABY42_00845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hgi03032]
    ABY42_00845
   03400 DNA repair and recombination proteins [BR:hgi03400]
    ABY42_00845
DNA replication proteins [BR:hgi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    ABY42_00845
DNA repair and recombination proteins [BR:hgi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     ABY42_00845
   MMR (mismatch excision repair)
    Other MMR factors
     ABY42_00845
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    ABY42_00845
SSDB
Motif
Pfam: PCNA_N PCNA_C
Other DBs
NCBI-ProteinID: AKU06357
UniProt: A0A0K1IP84
LinkDB
Position
complement(159515..160258)
AA seq 247 aa
MFKAIVSAATLRDALDSVSVLVDECKIRLNEESLSIRAVDPANVGMVDLTLDAAAFESYE
ADGGVIGVNLSRLEEVAGMAGSGDLIHLTLDEETRKLNIRIDGLSYTLALIDPDSIRQEP
DIPDLDLAANIVLEGTHLDRGIKAADMVSDHIRLRVDGAEETFHIEAEGDTDDVDLSLPP
ADLISIEAGAADSLFSLDYLKDMNKAIPTDAEVTVELGEEFPVKLHYQIAEGMGTITYML
APRIQSD
NT seq 744 nt   +upstreamnt  +downstreamnt
atgttcaaggccatcgtgagcgccgcgacgctccgggacgcgctcgactccgtgagcgtc
ctcgtcgacgagtgtaagattcgactcaacgaggagagtctctccatccgcgccgtcgac
cccgcgaacgtcggcatggtggacctcacgctcgacgcggcggcgttcgaatcctacgaa
gccgacggcggcgtcatcggcgtcaacctctctcgcctcgaagaggtcgccgggatggcg
ggctcgggcgacctcatccacctcacgctcgacgaggagacgcgcaagctcaacatccgc
atcgacgggctgtcgtacacgctcgcgctcatcgaccccgactcgattcgccaggaaccc
gacattccggacctcgacctcgccgcgaacatcgtcctcgaagggacgcacctcgaccgc
ggtatcaaggcggccgacatggtctccgaccacatccgcctccgcgtcgacggcgcggaa
gagacgttccacatcgaggccgaaggcgacaccgacgacgttgacctgtcgcttcccccc
gcggacctcatcagcatcgaagccggcgcggccgactcgctgttctcgctggactacctg
aaggacatgaacaaggcgattccgaccgacgccgaggtcaccgtcgaactcggcgaggag
ttcccggtcaagcttcactaccagatcgcggaagggatgggcaccatcacgtacatgctc
gccccgcgcatccagagcgactga

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