Haloferax gibbonsii: ABY42_00905
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Entry
ABY42_00905 CDS
T04025
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
hgi
Haloferax gibbonsii
Pathway
hgi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ABY42_00905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hgi03400
]
ABY42_00905
DNA repair and recombination proteins [BR:
hgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
ABY42_00905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
HHH_5
HHH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
AKU06369
UniProt:
A0A0K1IPL0
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All DBs
Position
170180..172174
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AA seq
664 aa
AA seq
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MDFETIPGVGEKTAAALAELDDAERALTDGDVAALARAPGLTEGRAAAIARGAIRRDHDD
PGGFLATDRASEIYRDALGLLQARTVTTYAEKRLETLFPTGSASRIEEVRAFAADATDLD
PDPDVLAALSGVEPLADPKPRRVRERCIATADAERYAAAKEAFPELSIEVVEDGRDIAEL
ARSYSTVVVLDESFAGIDVDGDVRVLPDAAERTDEVVPERLLAFFAANREALSAAAAVHE
AAGLSPPCDLAALRDALSRLADDGTVLGDDELERLSNAVDDLDTAVSTAESVANDRLRDV
IRERDVTIEGTDFLSLVEQGARVDSLLSRELEDEFDEALSAARDHLVESLSLRPGEADLT
ERVFPEDPSFPLGHDEEAVGRLRTELKAARDRRAAKLKADLAADLGDLRDPVETLVRDAL
ELDVRLAVSRFARDFDCVFPEFTGAAGNDGAGSFAIEAGRSPLLDVDFADVDPVDYEVSG
VTLLSGVNSGGKTSTLDLVGLVVVLAHMGLPVPAESVRLSRFSELHYYAKSQGTLDAGAF
ESTLRDFAALTDGAADRLVLVDELESITEPGASAKIIAGILEELAEQGAAAVFVSHLAGG
IREAADVSVAVDGIEAVGLEDGELVVNRSPVKDHLARSTPELIVEKLAGENETSFYGRLL
EKFD
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgagaccatcccgggcgtcggcgagaagaccgccgccgcgctcgcggaactc
gacgacgccgagcgagcgctcaccgacggcgacgtggcggcgctcgcgcgggcaccgggg
ctcacggagggcagggcggcggccatcgcccgcggggcgattcgccgcgaccacgacgac
cccggcggcttcctcgccaccgaccgcgcctcggaaatctaccgcgacgcgctcggtctc
ctgcaggcgcggacggtcacgacgtacgccgagaagcgactggagacgctgtttcccacc
gggtcggcctcgcgcatcgaggaggtccgggcgttcgcggccgacgcgaccgacctcgac
cccgacccggacgtgctcgccgcgctgtcgggcgtcgaacccctcgcggacccgaagccg
cgtcgcgtccgcgagcgctgtatcgccactgccgacgcggagcgctacgccgccgccaag
gaggcgttccccgaactctcaatcgaggtcgtcgaggacggccgcgacatcgccgaactc
gcgcggtcgtactcgacggtggtcgtcctcgacgagtcgttcgccggcatcgacgtcgac
ggcgatgtgcgcgtcctccccgacgccgccgagcggaccgacgaggtcgtccccgagcga
ctgctcgccttcttcgccgcgaaccgcgaggcgctttcggccgccgccgcggtccacgag
gccgccggactctccccgccgtgcgacctcgccgccctccgagacgccctgtcccgactg
gccgacgacgggaccgtcctcggcgacgacgaactcgaacggctctcgaacgcggtcgac
gacctcgacacggccgtctcgaccgccgaatcggtcgccaacgaccgcctccgcgacgtg
attcgcgagcgcgacgtgaccatcgaggggaccgatttcctgtctctcgtcgagcagggc
gcgcgcgtcgactccctgctgtcgcgcgaactcgaagacgagttcgacgaggcgctttcg
gccgcccgcgaccacctcgtggagtcgctgtcgctccgccccggcgaggccgacctgacg
gagcgcgtcttccccgaggacccgtcgttcccgctcggccacgacgaggaggcggtcggc
cggctccggaccgaactgaaggccgcccgcgaccgccgcgccgcgaagctgaaagccgac
ctcgccgccgacctcggcgacctgcgcgaccccgtcgagacgctggtccgcgacgcgctc
gaactcgacgtgcgcctcgccgtctcgcggttcgcccgcgacttcgactgcgtcttcccc
gagttcaccggcgcggccggaaacgacggcgccggctcgttcgccatcgaggccggccgc
tcgcccctcctcgacgtggacttcgcggacgtcgaccccgtggactacgaagtgtcgggc
gtcacgctcctctcgggcgtcaacagcgggggtaagacctcgacgctcgacctcgtgggg
ctcgtcgtcgtcctcgcgcacatggggcttcccgtgcccgccgagtcggtccgactctcg
cgtttttccgaactccactactacgccaagtcgcagggaaccctcgacgccggggccttc
gagagcacgctccgcgacttcgccgcgctcaccgacggcgcggccgaccgactcgtcctc
gtggacgaactggagagcatcaccgaacccggcgcgtccgccaaaatcatcgccggcatc
ctcgaagaactcgcggaacagggcgcggcggccgtgttcgtctcgcacctcgccggcggc
atccgcgaggccgccgacgtgtcggtcgcggtcgacggcatcgaggcggtcgggctggaa
gacggcgaactcgtcgtcaaccgctcgcccgtgaaggaccacctcgcacggtcgaccccg
gagctcatcgtggagaaactggccggcgagaacgagacgagtttctacgggcgactgctg
gagaagttcgactga
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