Haloferax gibbonsii: ABY42_01095
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Entry
ABY42_01095 CDS
T04025
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hgi
Haloferax gibbonsii
Pathway
hgi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ABY42_01095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hgi03021
]
ABY42_01095
Transcription machinery [BR:
hgi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
ABY42_01095
Prokaryotic type
Archaeal type
TFB
ABY42_01095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
UNC45-central
Motif
Other DBs
NCBI-ProteinID:
AKU06406
UniProt:
A0A0K1IPK9
LinkDB
All DBs
Position
complement(206163..207029)
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AA seq
288 aa
AA seq
DB search
MSEARSPQGCPECDGHLGFEAGETVCTDCGLVVSEYRIDHGPEWRSFADDDRNPARTGAP
LTRSRHDRGLSTEIGRSTRIKGRKRRQFARMRRQHNRARISTKRERNQVYAFTEIRRVTS
ALSLPNHIRDQACSLFESAQNEDLLRGRSLEGFAAACVYAACRVAGVSRSVEEVCDVSKA
TEAEHQAAYGALNRDLGLPVAPADPTEYLPRFATKLDLDSDTERRAREYVAEAREEGVVG
GKNPCGVAAACLYTAARDRGEDCTQAEAADVADVTPVTLRKTYVALRE
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcacgttccccccagggttgccccgaatgcgacggacacctcggtttcgaa
gccggcgagacggtctgtaccgactgcggtctcgtcgtctcggagtaccgcatcgaccac
ggccccgagtggcgctcgttcgccgacgacgaccggaaccccgcccgcaccggcgcgccg
ctcacccgctcgcgccacgaccgcggcctgtcgaccgaaatcggccgctcgacgcgtatc
aagggtcgcaagcgccggcagttcgcccgcatgcgccgccagcacaaccgcgctcgcatc
tcgaccaagcgcgagcgcaatcaggtgtacgccttcaccgagattcgccgcgtgacgagc
gcgctgtcgctgccgaaccacatccgcgaccaggcgtgttcgctgttcgagtccgcccag
aacgaggacctcctgcgcgggcgctcgctcgaagggttcgccgcggcctgcgtctacgcc
gcctgccgcgtcgccggcgtctcccggagcgtcgaggaagtctgcgacgtgtcgaaggcc
accgaggcggaacaccaagcggcctacggcgcgctcaaccgcgacctcggtctccccgtc
gcgcccgccgacccgaccgagtaccttccgcggttcgcgaccaagctcgacctcgacagc
gacaccgagcgccgggcgcgcgagtacgtcgccgaagcccgcgaggagggcgtcgttggc
ggcaagaacccctgcggcgtcgccgcggcgtgtctctacaccgcggctcgcgaccgcggc
gaggactgcacgcaggccgaggccgccgacgtggccgacgtgacgcccgtgacgctccgc
aagacgtacgtggcgctccgcgagtga
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integrated database retrieval system
