Haloferax gibbonsii: ABY42_01330
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Entry
ABY42_01330 CDS
T04025
Name
(GenBank) RNA polymerase sigma70
KO
K09714
HTH-type transcriptional regulator, fmd operon transcriptional regulator
Organism
hgi
Haloferax gibbonsii
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hgi03000
]
ABY42_01330
Transcription factors [BR:
hgi03000
]
Prokaryotic type
Helix-turn-helix
Other families
ABY42_01330
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GFIT
Motif
Pfam:
TFX_C
Sigma70_r4
GerE
HTH_Crp_2
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AKU06449
UniProt:
A0A0K1IPU2
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Position
complement(246254..246748)
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AA seq
164 aa
AA seq
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MSDAGRDDETVPDVDELLDRAGFDPETSVLTRRQAEVLALRERDVRQSTIADFLGTSRAN
VSSIEASARANVEKARETVTFVDALTAPVRVEVPAGSDLYDVPKQVYDACDEAGVKVNQT
APDLMKIVSDAAGDAVEGREIKEQLFVGVTSDGRVRVRRHADGV
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgccggacgcgacgacgagacggttcccgacgtagacgaactcctcgataga
gccgggttcgacccggagacgagcgtcctcacccggaggcaggcagaggtgctcgcgctg
cgcgagcgggacgtccgccagtcgaccatcgccgacttcctcggcacctcgcgggcgaac
gtctccagcatcgaagccagcgcccgcgccaacgtcgagaaggcccgcgagacggtgacg
ttcgtcgacgcgctcaccgcgccggtccgcgtcgaggtccccgccggaagcgacctctac
gacgtgcccaagcaggtgtacgacgcctgcgacgaggcgggcgtgaaagtgaaccagacc
gcgccggacctgatgaaaatcgtctccgacgcggccggcgacgccgtggaggggcgagaa
atcaaagaacagctcttcgtcggcgtcacgagcgacgggcgcgtccgtgtccgccggcac
gccgacggggtctga
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