KEGG   Haloferax gibbonsii: ABY42_01330
Entry
ABY42_01330       CDS       T04025                                 
Name
(GenBank) RNA polymerase sigma70
  KO
K09714  HTH-type transcriptional regulator, fmd operon transcriptional regulator
Organism
hgi  Haloferax gibbonsii
Brite
KEGG Orthology (KO) [BR:hgi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hgi03000]
    ABY42_01330
Transcription factors [BR:hgi03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    ABY42_01330
SSDB
Motif
Pfam: TFX_C Sigma70_r4 GerE HTH_Crp_2 HTH_31
Other DBs
NCBI-ProteinID: AKU06449
UniProt: A0A0K1IPU2
LinkDB
Position
complement(246254..246748)
AA seq 164 aa
MSDAGRDDETVPDVDELLDRAGFDPETSVLTRRQAEVLALRERDVRQSTIADFLGTSRAN
VSSIEASARANVEKARETVTFVDALTAPVRVEVPAGSDLYDVPKQVYDACDEAGVKVNQT
APDLMKIVSDAAGDAVEGREIKEQLFVGVTSDGRVRVRRHADGV
NT seq 495 nt   +upstreamnt  +downstreamnt
atgagcgacgccggacgcgacgacgagacggttcccgacgtagacgaactcctcgataga
gccgggttcgacccggagacgagcgtcctcacccggaggcaggcagaggtgctcgcgctg
cgcgagcgggacgtccgccagtcgaccatcgccgacttcctcggcacctcgcgggcgaac
gtctccagcatcgaagccagcgcccgcgccaacgtcgagaaggcccgcgagacggtgacg
ttcgtcgacgcgctcaccgcgccggtccgcgtcgaggtccccgccggaagcgacctctac
gacgtgcccaagcaggtgtacgacgcctgcgacgaggcgggcgtgaaagtgaaccagacc
gcgccggacctgatgaaaatcgtctccgacgcggccggcgacgccgtggaggggcgagaa
atcaaagaacagctcttcgtcggcgtcacgagcgacgggcgcgtccgtgtccgccggcac
gccgacggggtctga

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