Haloferax gibbonsii: ABY42_01590
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Entry
ABY42_01590 CDS
T04025
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
hgi
Haloferax gibbonsii
Pathway
hgi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABY42_01590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hgi03021
]
ABY42_01590
Enzymes [BR:
hgi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABY42_01590
Transcription machinery [BR:
hgi03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
ABY42_01590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
AKU06497
UniProt:
A0A0K1IPL5
LinkDB
All DBs
Position
298174..301098
Genome browser
AA seq
974 aa
AA seq
DB search
MQTPKEIGSIQFGLMDPETYRDMSATKVITADTYDDDGYPIDMGLMDPRLGVIDPGLQCR
TCGQHSGSCNGHFGHIELAAPVIHVGFTKLIRRLLRSTCRECGRLSLTDEEADEYRDKLG
RTKELGDDWSDVMKSAVRQARKAHRCPHCGSPQHDIKHEKPTTYYEVQNVLAGDYSERIA
EAMQPDPDDEDDEGVDPVTLANETGLDAERVNQVLAGEFRPVGDDRKALEKALDLDLTEE
DMNKLMPSDIRDWFEDIPDEDLITLGIDPDRSRPEWMILTVLPVPPVTARPSITLDNGQR
SEDDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFIDNEISGTPPARHR
SGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPDRVASEMTQT
MNVTERNIDEARQYVRNGPESHPGANYVRRPDGRRLKVTEKNCEELAEKVELGWEVNRHL
VDGDIVIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTVVCPPYNADFDGDEMNMHALQNEE
ARAEARVLMRVQEQILSPRFGENIIGAIQDHISGTYLLTHDNPEFVETQALDLLRATRVD
TLPEPAGENEDGQPYWTGQQIFSELLPDDLNMEFTSKVGDTVTIEDGQLTQGTIDEDAVG
AFGGEIVDALAKDYSKTRSRIFINEIASLAMRAIMHFGLSIGIDDESIPDEATAQVDEAI
DAAYDKIQELIEIYEAGELESLPGRSVDETLEMKIMQRLGKARDSAGEIAEDHFEEDNPA
VVMSKSGARASMLNLTQMAGCVGQQAVRGERINRGYEGRTLSHYQKGDLSAEAHGFVENS
YRAGLTPREFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELEAQYDGSVRDTSGTI
VQFEFGEDGTSPVKVSSDDETPIDVENIADRILTSEFSSAEEKERFLGEREPPTNLSEHA
EPRVDARAGVESDD
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgcagacacccaaagaaatcggcagcatccagttcgggttgatggacccggagacgtac
cgagacatgtccgcgacgaaggtcatcaccgcggacacctacgacgacgacggctaccca
atcgacatgggtctcatggacccgcggctgggcgtcatcgaccccggcctgcagtgccgc
acctgcggccagcactccgggtcgtgtaacgggcacttcggccacatcgaactggccgcg
cccgtcatccacgtcggcttcacgaagctcatccgccgcctgctccgctcgacgtgccgc
gagtgcggtcgcctctcgctcacggacgaggaagcagacgagtaccgcgacaagctcggt
cgcacgaaggaactcggcgacgactggagcgacgtgatgaagtcggcagtccggcaggcc
cgcaaggcccaccgctgtccccactgcggctcgccgcagcacgacatcaaacacgagaag
ccgacgacctactacgaggtccagaacgtgctcgccggggactactccgagcgcatcgcc
gaagcgatgcagcccgaccccgacgacgaggacgacgagggcgtcgaccccgtcaccctc
gctaacgagaccggcctcgacgccgagcgcgtcaaccaggtgctcgccggcgagttccgc
ccggtcggcgacgaccgcaaggcgctcgagaaggcgctcgacctcgacctcacggaagag
gacatgaacaagctgatgccctcggacatccgcgactggttcgaggacatcccggacgag
gacctcatcacgctcggcatcgaccccgaccggtcgcgccccgagtggatgattctgacc
gtcctccccgtcccgccggtcacggcgcgtccctctatcacgctggacaacggccagcgc
tccgaggacgacctgacccacaagctcgtggacatcatccgcatcaaccagcggttcatg
gagaaccgcgaggcgggtgccccgcagctgattatcgaggacctgtgggagctgcttcag
taccacgtcaccacgttcatcgacaacgagatttcgggcacgccgccggcgcggcaccgc
tccggccgcccgctgaagacgctcagccagcgcctgaagggcaaggagggtcgcttccgc
ggttccctgtccggaaagcgcgtcaacttctcggctcgtaccgtcatctcgccggacccg
accctgtcgctcaacgaggtcggcgtcccggaccgcgtcgcgtccgagatgacccagacg
atgaacgtcaccgagcgcaacatcgacgaggctcgccagtacgtccgtaacggacccgag
agccaccccggcgcgaactacgtccgccgtccggacggccgccgcctgaaggtgaccgaa
aagaactgcgaggaactcgcggagaaggtcgaactcggctgggaggtcaaccgccacctc
gtcgacggcgacatcgtcatcttcaaccgacagccgtcgctgcaccggatgtccatcatg
gcgcacgaagtcgtcgtgatgccgtacaagacgttccgcctgaacaccgtcgtctgtccg
ccgtacaacgccgacttcgacggcgacgagatgaacatgcacgccctccagaacgaggag
gcccgtgccgaggcgcgcgtcctcatgcgcgtccaagagcagattctctcgccgcgcttc
ggtgagaacatcatcggcgcgattcaggaccacatctcgggcacctacctgctcacccac
gacaaccccgagttcgtcgagacgcaggcgctcgacctgctccgcgcgacgcgcgtggac
accctgcccgagcccgcgggcgaaaacgaggacggccagccctactggaccggccagcag
atcttctccgaactcctgcccgacgacctgaacatggagttcacttcgaaggtcggcgac
acggtcaccatcgaggacggccagctcactcagggcaccatcgacgaggacgccgtcggc
gcgttcggcggcgaaatcgtcgacgccctcgccaaggactactcgaagacgcgctcgcgc
atcttcatcaacgagatcgcctcgctcgcgatgcgcgccatcatgcacttcgggctctcc
atcggtatcgacgacgagtccatcccggacgaggcgacggcgcaggtcgacgaggccatc
gacgccgcctacgacaagattcaggaactcatcgaaatctacgaggcgggcgaactcgag
tccctgccgggtcgctccgtcgacgagaccctggagatgaagatcatgcagcgcctcggc
aaggcgcgtgactccgccggtgaaatcgcggaggaccacttcgaggaggacaaccccgcg
gtcgtgatgtcgaagtccggcgcgcgtgcgtccatgctcaacctgacccagatggccggc
tgcgtcggccagcaggcggttcggggcgagcgcatcaaccgcggctacgagggtcgcacc
ctgagccactaccagaaaggcgacctctcggccgaggcccacggcttcgtcgagaactcc
taccgcgccggcctcacgccgcgtgagttcttcttccacgcgatgggtggccgcgaaggg
ctggtcgacacggcagtccggacctcgaagtccgggtacctgcagcgtcggctcatcaac
gccctctccgaactcgaagcgcagtacgacggctccgtccgcgacacgtcggggaccatc
gtccagttcgagttcggcgaagacggcacgagcccggtgaaggtctcgtccgacgacgag
acgccgatcgacgtcgagaacatcgccgaccgcatcctcacctcggagttcagctccgcc
gaggagaaggaacgcttcctcggcgagcgcgaaccgccgaccaacctctccgagcacgcc
gaaccgcgtgtcgacgcccgtgcgggggtcgaatccgatgactga
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