KEGG   Haloferax gibbonsii: ABY42_01935
Entry
ABY42_01935       CDS       T04025                                 
Name
(GenBank) ATPase
  KO
K06174  ATP-binding cassette, sub-family E, member 1
Organism
hgi  Haloferax gibbonsii
Brite
KEGG Orthology (KO) [BR:hgi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hgi03009]
    ABY42_01935
Ribosome biogenesis [BR:hgi03009]
 Eukaryotic type
  Pre-40S particles
   Other pre-40S particles
    ABY42_01935
SSDB
Motif
Pfam: ABC_tran SMC_N AAA_21 Fer4_RLI AAA_23 AAA_16 AAA_22 AAA AAA_14 AAA_29 RNA_helicase NB-ARC Rad17 Fer4 AAA_24 RsgA_GTPase Fer4_6 Fer4_7 Fer4_10 Fer4_21
Other DBs
NCBI-ProteinID: AKU06563
UniProt: A0A0K1IQH3
LinkDB
Position
364690..366504
AA seq 604 aa
MADDSIAVVDLDRCSPDRCSYECSNFCPPNRTGKECITLRGEDAEQGGPDQVRISEEICL
GETCGICVEKCPFDAIEIINLPSELDEEPTHRYGENAFSLYGLPVPESGSVTGILGPNGI
GKTTAVRALAGEMVPNLGNYDDEPTWEAVLDRFRGTELQNYVEQVRDGEVSIARKPQYVD
QIPKQFDGSARDLLEATDERGALDSYIDRLDIGPVVDNDIETLSGGELQRVALAATLARD
RDFYFLDEISPYLDIGQRVTAARLIRELAEEEDRAVLVVEHDLAILDLLADTLHVAYGEP
GAYGVITDPKSVRNGINEYLKGYLSNENMRIRPEAITFEEHAPRETTKAEPLVEYPELAK
SYGDGEFSLDVEAGTIYNGEVLGIVGPNGIGKSTLAQLFTGDLTPDMGELDFALDISYKP
QYIEIDQPMRVDAFLSSITDQFGSSYWNTEIANPLQLNRIMERNLTDLSGGERQRVAIAA
CLSQDADLYLLDEPSAHLDVEQRVQATSAIRRYAENHDATVMVIDHDIYMMDLLADRLMV
FDGEPSIEGHASKPQEMRDGMNDFLSDLDITFRRDERTQRPRINKPDSQLDREQKRAGEY
YYAE
NT seq 1815 nt   +upstreamnt  +downstreamnt
atggccgacgatagtatcgccgtcgtcgacttagaccggtgttcccccgaccgctgtagc
tacgagtgctcgaacttctgtccgccgaaccggacgggcaaagagtgcatcacgctccgc
ggcgaggacgccgagcagggcggtcccgaccaggtgcgcatctccgaggaaatctgcctc
ggcgagacctgcggcatctgcgtcgagaagtgccccttcgatgcaatcgaaatcatcaac
ctcccctcggagctcgacgaggagccgacccaccgctacggcgagaacgctttctcgctg
tacggccttccggtccccgagtccggctcggtcacgggtatcctcggaccgaacggcatc
gggaagaccacggccgtccgcgccctcgcaggcgagatggtccccaacctcggcaactac
gacgacgagccgacgtgggaggccgtcctcgaccgcttccgcgggaccgaactccagaac
tacgtcgagcaggtccgcgacggcgaggtctccatcgcgcgcaagccgcagtacgtcgac
cagattcccaagcagttcgacggctcggcccgcgacctcttggaggcgaccgacgagcgc
ggcgcgctcgactcctacatcgaccgcctcgacatcggccccgtcgtcgacaacgacatc
gagacgctctccggcggcgagcttcagcgggtcgccctcgcggcgacgctcgcccgcgac
cgcgacttctacttcctcgacgagatttcgccgtacctcgacatcggccagcgcgtcacc
gccgcgcggctcatccgcgaactcgcggaggaagaagaccgcgcggtgctcgtggtcgaa
cacgacctcgccatcctcgacctgctcgccgacacgctccacgtcgcctacggtgagccc
ggcgcgtacggtgtcatcaccgaccccaagtcggtcagaaacggcatcaacgagtacctg
aaggggtatctctcgaacgagaacatgcgcatccgcccggaggcaatcaccttcgaggag
cacgcgccgcgcgagacgacgaaggccgaacccctcgtcgagtaccccgaactcgccaag
tcctacggcgacggcgagttctccctcgacgtcgaggccggcaccatctacaacggcgaa
gtgctcggcatcgtcggccccaacggcatcgggaagtccacgctcgcacagctctttacg
ggcgacctgacgcccgatatgggcgaactcgacttcgcgctcgacatctcgtacaagccg
cagtacatcgaaatcgaccagccgatgcgggtcgacgcgttcctctcgtctatcaccgac
cagttcggttcgtcgtactggaacaccgaaatcgcgaacccgctccagctcaaccgcatc
atggagcgcaacctcaccgacctctccggcggcgagcgccagcgcgtcgccatcgcggcg
tgcctctcgcaggacgccgacctctacctgctcgacgagccgtcggcccacctcgacgtg
gaacagcgcgtgcaggccacctcggccatccgccgctacgccgagaaccacgacgcgacg
gtcatggtcatcgaccacgacatctacatgatggacctgctcgcggaccgcctgatggtg
ttcgacggcgagccgtccatcgagggccacgcctcgaagccccaggagatgcgcgacggc
atgaacgacttcctgtcggacctcgacatcacgttccgccgcgacgagcgcacccagcgc
ccgcgcatcaacaagcccgactcgcaactcgaccgcgagcagaagcgcgccggcgagtac
tactacgccgaatag

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