Haloferax gibbonsii: ABY42_02430
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Entry
ABY42_02430 CDS
T04025
Name
(GenBank) replication factor A
KO
K07466
replication factor A1
Organism
hgi
Haloferax gibbonsii
Pathway
hgi03030
DNA replication
hgi03420
Nucleotide excision repair
hgi03430
Mismatch repair
hgi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABY42_02430
03420 Nucleotide excision repair
ABY42_02430
03430 Mismatch repair
ABY42_02430
03440 Homologous recombination
ABY42_02430
03460 Fanconi anemia pathway
ABY42_02430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hgi03000
]
ABY42_02430
03032 DNA replication proteins [BR:
hgi03032
]
ABY42_02430
03400 DNA repair and recombination proteins [BR:
hgi03400
]
ABY42_02430
Transcription factors [BR:
hgi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
ABY42_02430
DNA replication proteins [BR:
hgi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
ABY42_02430
DNA repair and recombination proteins [BR:
hgi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
ABY42_02430
MMR (mismatch excision repair)
ABY42_02430
DSBR (double strand breaks repair)
HR (homologous recombination)
ABY42_02430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
REPA_OB_2
Ssb-like_OB
SSB
HROB
DUF5666
Motif
Other DBs
NCBI-ProteinID:
AKU06652
UniProt:
A0A0K1IQ22
LinkDB
All DBs
Position
439543..441003
Genome browser
AA seq
486 aa
AA seq
DB search
MGVIREVYDDLDTDVEFEKFEAAVNDKVEQMGGLADEETAAMLIAHELRDEEVNGIADIE
PGMEDVKFLAKVVSIGEVRTFERDGEDEDGRVVNIEVADETGRIRVSLWDEMAAGAKENL
EVGTVLRIGGRPKDGYNGVEVSASKVEEDLDAEVDVQVLDTYRVEDLALGLSDVNLEGKI
LDTGTVRTFDRDDGTEGRVSNLSVGDPTGRVRVTLWDERADLAEELETGQSVEVVDGYVR
ERDGSLELHVGSRGAVEVIDEDIEYVPETTDIGTLELGQTVDIAGGVIEADGKRTFDRDD
GSEGQVRNIRVKDGTGDIRVALWGEKADADVDLADYVVITDVEIKDGWQEDLEASAGWRS
SVTVMDEAPEGAAGTDAGDSGPTPPSDQGLGAFSGGGSSESSGDASAANGGSSSDATATE
SAGESVEFTGTVVQAGTPVILDDGTQTKTVDTEADLGLGDEVTVSGTETDGRISAETVEV
HTGAQR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtcattcgggaggtctacgacgacctcgacaccgatgtcgagttcgagaagttc
gaggcggcggtcaacgataaggtcgaacagatgggcggcctcgccgacgaggagacggcg
gcgatgctcatcgcccacgaactacgcgacgaggaggtcaacggcatcgccgacatcgaa
ccgggcatggaggacgtgaagttcctcgccaaggtcgtcagcatcggcgaggtccggacg
ttcgaacgcgacggcgaggacgaagacgggcgggtcgtcaacattgaggtcgccgacgag
accggtcgcatccgcgtctcgctgtgggacgagatggccgccggcgcgaaggagaacctc
gaagtcggtaccgtcctccgcatcggcggtcgcccgaaagacggctacaacggcgtcgag
gtcagcgcgagcaaggtcgaagaggacctcgacgccgaggtcgacgtgcaggtgctcgac
acctaccgcgtcgaagacctcgcgctcggcctctcggacgtgaacctcgaaggcaagatt
ctcgacaccggaaccgtccgaacgttcgaccgcgacgacggcaccgagggtcgcgtctcg
aacctctccgtcggcgacccgaccggtcgcgtccgcgtcacgctctgggacgagcgagcg
gacctcgccgaggagctcgaaaccggccagtcggtcgaggtcgtcgacggctacgtccgc
gagcgcgacggctcgctcgaactccacgtcggctcccgcggcgcggtcgaagtcatcgac
gaggacatcgagtacgtccccgagacgaccgacatcggcacgctcgaactcggccagacg
gtcgacatcgccggcggcgtcatcgaggcggacggcaagcgcaccttcgaccgcgacgac
ggttccgagggacaggtccgcaacatccgcgtcaaggacggcaccggcgacatccgggtc
gccctctggggcgagaaggccgacgccgacgtcgacctcgcggactacgtcgtcatcacc
gacgtggagataaaagacggctggcaggaggacctcgaagcctccgccggctggcggtcg
tccgtcaccgtgatggacgaggcccccgagggcgcggccgggaccgatgccggcgattcg
ggaccgacgccgccgagcgaccagggcctcggcgcgttctcaggcggcggttcgtccgag
tcgtctggtgacgcgtccgccgcgaacggcgggtcctcgtcggacgcgaccgcgacggag
tccgccggcgagtcggtcgagttcaccgggacggtcgtgcaggccgggacgccggtcatc
ctcgacgacggcacgcagaccaagaccgtcgacaccgaagccgacctcggcctcggcgac
gaggtgacggtctccggcacggagaccgacggccgcatcagcgccgagacggtcgaggtc
cacaccggcgcacagcggtaa
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