KEGG   Haloferax gibbonsii: ABY42_02430
Entry
ABY42_02430       CDS       T04025                                 
Name
(GenBank) replication factor A
  KO
K07466  replication factor A1
Organism
hgi  Haloferax gibbonsii
Pathway
hgi03030  DNA replication
hgi03420  Nucleotide excision repair
hgi03430  Mismatch repair
hgi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hgi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ABY42_02430
   03420 Nucleotide excision repair
    ABY42_02430
   03430 Mismatch repair
    ABY42_02430
   03440 Homologous recombination
    ABY42_02430
   03460 Fanconi anemia pathway
    ABY42_02430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hgi03000]
    ABY42_02430
   03032 DNA replication proteins [BR:hgi03032]
    ABY42_02430
   03400 DNA repair and recombination proteins [BR:hgi03400]
    ABY42_02430
Transcription factors [BR:hgi03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    ABY42_02430
DNA replication proteins [BR:hgi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    ABY42_02430
DNA repair and recombination proteins [BR:hgi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     ABY42_02430
   MMR (mismatch excision repair)
     ABY42_02430
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     ABY42_02430
SSDB
Motif
Pfam: tRNA_anti-codon CDC24_OB3 REPA_OB_2 Ssb-like_OB SSB HROB DUF5666
Other DBs
NCBI-ProteinID: AKU06652
UniProt: A0A0K1IQ22
LinkDB
Position
439543..441003
AA seq 486 aa
MGVIREVYDDLDTDVEFEKFEAAVNDKVEQMGGLADEETAAMLIAHELRDEEVNGIADIE
PGMEDVKFLAKVVSIGEVRTFERDGEDEDGRVVNIEVADETGRIRVSLWDEMAAGAKENL
EVGTVLRIGGRPKDGYNGVEVSASKVEEDLDAEVDVQVLDTYRVEDLALGLSDVNLEGKI
LDTGTVRTFDRDDGTEGRVSNLSVGDPTGRVRVTLWDERADLAEELETGQSVEVVDGYVR
ERDGSLELHVGSRGAVEVIDEDIEYVPETTDIGTLELGQTVDIAGGVIEADGKRTFDRDD
GSEGQVRNIRVKDGTGDIRVALWGEKADADVDLADYVVITDVEIKDGWQEDLEASAGWRS
SVTVMDEAPEGAAGTDAGDSGPTPPSDQGLGAFSGGGSSESSGDASAANGGSSSDATATE
SAGESVEFTGTVVQAGTPVILDDGTQTKTVDTEADLGLGDEVTVSGTETDGRISAETVEV
HTGAQR
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgggcgtcattcgggaggtctacgacgacctcgacaccgatgtcgagttcgagaagttc
gaggcggcggtcaacgataaggtcgaacagatgggcggcctcgccgacgaggagacggcg
gcgatgctcatcgcccacgaactacgcgacgaggaggtcaacggcatcgccgacatcgaa
ccgggcatggaggacgtgaagttcctcgccaaggtcgtcagcatcggcgaggtccggacg
ttcgaacgcgacggcgaggacgaagacgggcgggtcgtcaacattgaggtcgccgacgag
accggtcgcatccgcgtctcgctgtgggacgagatggccgccggcgcgaaggagaacctc
gaagtcggtaccgtcctccgcatcggcggtcgcccgaaagacggctacaacggcgtcgag
gtcagcgcgagcaaggtcgaagaggacctcgacgccgaggtcgacgtgcaggtgctcgac
acctaccgcgtcgaagacctcgcgctcggcctctcggacgtgaacctcgaaggcaagatt
ctcgacaccggaaccgtccgaacgttcgaccgcgacgacggcaccgagggtcgcgtctcg
aacctctccgtcggcgacccgaccggtcgcgtccgcgtcacgctctgggacgagcgagcg
gacctcgccgaggagctcgaaaccggccagtcggtcgaggtcgtcgacggctacgtccgc
gagcgcgacggctcgctcgaactccacgtcggctcccgcggcgcggtcgaagtcatcgac
gaggacatcgagtacgtccccgagacgaccgacatcggcacgctcgaactcggccagacg
gtcgacatcgccggcggcgtcatcgaggcggacggcaagcgcaccttcgaccgcgacgac
ggttccgagggacaggtccgcaacatccgcgtcaaggacggcaccggcgacatccgggtc
gccctctggggcgagaaggccgacgccgacgtcgacctcgcggactacgtcgtcatcacc
gacgtggagataaaagacggctggcaggaggacctcgaagcctccgccggctggcggtcg
tccgtcaccgtgatggacgaggcccccgagggcgcggccgggaccgatgccggcgattcg
ggaccgacgccgccgagcgaccagggcctcggcgcgttctcaggcggcggttcgtccgag
tcgtctggtgacgcgtccgccgcgaacggcgggtcctcgtcggacgcgaccgcgacggag
tccgccggcgagtcggtcgagttcaccgggacggtcgtgcaggccgggacgccggtcatc
ctcgacgacggcacgcagaccaagaccgtcgacaccgaagccgacctcggcctcggcgac
gaggtgacggtctccggcacggagaccgacggccgcatcagcgccgagacggtcgaggtc
cacaccggcgcacagcggtaa

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