Haloferax gibbonsii: ABY42_02530
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Entry
ABY42_02530 CDS
T04025
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
hgi
Haloferax gibbonsii
Pathway
hgi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ABY42_02530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hgi03400
]
ABY42_02530
DNA repair and recombination proteins [BR:
hgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
ABY42_02530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
AAA_27
AAA_14
NFACT_N
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AKU06670
UniProt:
A0A0K1IQS4
LinkDB
All DBs
Position
complement(459611..462349)
Genome browser
AA seq
912 aa
AA seq
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MTTQGIVGQFLSLKEETDADLLAMQCGDFYEFFADDAETVGRELDLKVSQKSSHGSSYPM
AGVPLNDLTPYLKALVERGYRVAVADQYETESGDLRREIKRVVTPGTLLETSRADAQFLA
AVVTDGDGVGLAFADITTGQFLVTEAATVDDAAAELYRFAPVEVLPGPELRGDDETLSRL
REATDASFSLFSTEAFAPGRARHAVREQFGASTVDSVGLDSDLATRAAGGVLAYVEETGA
GVLRSMTRLQVYHPSDLLELDATTQRNLELIETMHGDRSGSLFDTIDHTVTSPGGRLLRE
WLTRPRRDRDELARRLDAVQSLAAAALARERVREVLDGAYDLERLASRSASESAGASDLL
SVRDTLSVLPALADAIEGTELADSPLAEVVSRPDRDAAADLRADLADALAEDPPKTVTQG
GLFQKGYDDELDALIERHESAKSWLDTLADREKRDHGLSHVTVDRNKTDGYYIQVGKSVA
DQVPEHYRQIKTLKNSKRFVTEELEEKEREVLRLEEARGDLEYELFEDLRERVARRAELL
QDVGRTIAEVDALASLATHAAGNGWTRPELTDAGALDIEAGRHPVVETTTDFVPNDLRMD
DERGFLIVTGPNMSGKSTYMRQAALITLLAQVGSFVPARSATVGVVDGIYTRVGALDELA
QGRSTFMVEMQELSNILHSATEDSLVILDEVGRGTATYDGISIAWAATEYLHNEIRAKTL
FATHYHELTTLADHLDRVANVHVAADERDGDVTFLRTVVDGPTDRSYGIHVADLAGVPRP
VVDRAADVLDRLREEKAIEAKGSGTSEPVQAVFDVGSGQMNVAEGGDAAGDSAGSGAPAN
GATGNGSAGALAGASTEAADAETETESGAAVDPEAEAVLDELRATDVNDTSPLDLMAKVQ
AWQSKLDGGDGA
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgactactcagggaatcgtcggacagttcctctcgctgaaagaggagaccgacgccgac
ctgctcgccatgcagtgcggcgacttctacgagttcttcgccgacgacgccgagaccgtc
ggccgcgaactcgacctcaaggtctcccagaagtcctcgcacgggtcgtcgtatccgatg
gcgggcgtgccgctgaacgacctgacgccctacctcaaggcgctcgtcgagcgcggctac
cgggtcgccgtcgccgaccagtacgagaccgagtccggcgaccttcgccgcgaaatcaag
cgcgtcgtcacgccggggacgctcctcgaaacgtcgcgcgccgacgcgcagttcctcgcg
gccgtcgtgaccgacggcgacggggtcggcctcgcgttcgccgacatcaccaccggccag
ttcctcgtcaccgaggccgcgaccgtcgacgacgccgcggccgaactctaccgcttcgcc
cccgtcgaagtcctccccggcccggaactgcgcggcgacgacgagaccctctctcggctg
cgcgaggccacggacgcctccttctcgcttttctccaccgaggcgttcgcgccgggtcgc
gcccgccacgccgtccgcgagcagttcggcgcgtccacggtcgacagcgtcggtcttgac
tccgacctcgcgacccgcgccgccggcggcgtcctcgcctacgtcgaggagacgggcgcg
ggcgtcctccggtcgatgacccgcctgcaggtctaccacccctcggacctgctcgaactc
gacgcgaccacccagcgcaacctcgaactcatcgagacgatgcacggcgaccgctcgggg
tcgctgttcgacacgatagaccacaccgtcacctctcccggcggccgcctcctccgggag
tggttgacccgaccgcggcgcgaccgcgacgaactcgcccgccgactcgacgccgtgcag
tcgctcgccgcggccgccctcgcccgcgagcgcgttcgcgaggtgctcgacggggcgtac
gacctcgaacggctcgcctcccggtcggcgtccgagagcgccggcgcgtccgacctgctg
tcggtccgggacaccctctccgtgcttcccgcgctcgccgacgccatcgaggggaccgaa
ctcgcggactctccgctcgcggaagtcgtctcgcggccggaccgggacgccgcggccgac
ctccgcgccgacctcgccgacgcgctcgccgaggacccgccgaagacggtcacgcagggc
gggctgttccagaagggctacgacgacgaactcgacgccctcatcgagcgccacgagtcg
gcgaagtcgtggctcgacacgctcgccgaccgcgaaaagcgggaccacggcctctcgcac
gtcaccgtcgaccgcaacaagaccgacggctactacatccaggtcggcaagtcggtcgcc
gaccaggtgcccgaacactaccggcagataaagacgctcaagaactcaaagcgcttcgtc
accgaggagttagaggagaaggaacgcgaggtgctccggctcgaagaggcccgcggcgac
ctcgaatacgaactgttcgaggacctccgcgagcgcgtggcccggcgcgccgaactctta
caggacgtgggccggaccatcgccgaggtggacgcgctggcgtcgctcgcgacccacgcc
gccggcaacggctggacgcgccccgaactcacggacgccggggcgctcgacatcgaggcc
ggtcgccacccggtcgtggagacgacgaccgacttcgtcccgaacgacctccgcatggac
gacgagcgcggcttcctcatcgtcaccgggccgaacatgtccggcaaatcgacgtacatg
cggcaggcggcgctcatcacgctcctcgcgcaggtcggcagtttcgtccccgcgcgctcg
gcgaccgtcggcgtcgtcgacggcatctacacccgcgtcggcgcgctggacgaactcgcg
cagggtcgctcgacgttcatggtcgagatgcaggaactctcgaacatcctccactcggcc
accgaggactcgctcgtcatcctcgacgaggtgggccgcggaaccgccacctacgacggc
atctccatcgcgtgggcggccaccgaatacctgcataacgagatacgggccaagacgctc
ttcgccacgcactaccacgagctgacgaccctcgcggaccacctcgaccgcgtcgccaac
gtccacgtcgccgccgacgagcgcgacggggacgtgaccttcctcaggaccgtcgtcgac
ggcccgaccgaccggagttacgggattcacgtcgccgatttggcgggggttccgcgcccg
gtcgtcgaccgcgccgccgacgtgctcgaccggctccgcgaggagaaggccatcgaggcg
aaggggtccggaacctcggagcccgtacaggccgtcttcgacgtggggagcggacagatg
aacgtcgcggagggcggcgacgccgccggcgattcggcgggctccggcgcgcccgcgaac
ggcgcgacgggcaacgggtcggccggggcgctcgccggggcgagcaccgaggcggccgac
gccgagacagagaccgagtccggggccgcggtggacccggaggccgaagccgtcctcgac
gaactccgggcgaccgacgtgaacgacacgtcgccgctggacctgatggcgaaggtgcag
gcctggcagtcgaaactggacggcggtgacggcgcatga
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