Haloferax gibbonsii: ABY42_02600
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Entry
ABY42_02600 CDS
T04025
Name
(GenBank) alpha-amylase
Organism
hgi
Haloferax gibbonsii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Glyco_hydro_42C
Alpha-amylase_C
Malt_amylase_C
SusG_C
DUF3459
SupH-like_C
DUF6924
Motif
Other DBs
NCBI-ProteinID:
AKU06683
UniProt:
A0A0K1IQU3
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Position
478318..480501
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AA seq
727 aa
AA seq
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MHHPGPPRVTTVGRPVELAPRAPERDATYRWRVLDAPEESAVAVGSGPVAHLAPDVPGTY
RLELDAPDGRHEQTVRAFPDDRRPATMAVPAADLEPASPDEVSVIGPFNDRLVGRDRPRR
VGDDYALDVDLPPGTHPFGFAPHDDLAEQVRGEVEVPGPGRPRVRLDARAEQGDCDELVV
VADAESAPDAEEATLSVEFLFDGRDALEPGDCEVDGDSLRVPVETLREFDSSEPVRVHAV
AVQTTTESGESSVRHSVLDTLVVESGGAGDETGSGLAGLAVSRPGDAPEWAHHATVYEVF
VRSFVGETPDPTFDELARRVPYLESLGVDCLWLTPILESHTTHGYHVTDYFETASDLGTR
GDFEALVDRCHDAGIRVVFDLVINHTSRDHPAFQFHSTGVPGYEDHYARVPEREDPSEVD
WGGPGAAEHYFNWTRIPNLNYDSPAVRSWMLDVVSEWAAVVDGFRCDVAWGVPHGFWKEV
RERVKADDPDFLLLDETIPRDPAYHETEFDAHYDTTLYGSLRDVGAGEKPATAVLDAVAD
ARWHGFPDDAVQLRYIENHDEERYRSEVGEDALRAAAAATFTLPGAPMIYYGQETGVEAQ
RGTMRWYDADTDLVEFHRRLSRLRDAHEVLRVGDVEPVPASVAPAGNGGVESDRVVAFAR
DDGTDRLVVVLNFDGEPTTVELGAEVEGTDLLTGERVDAGGAAGGDGRARVTVADAAVLR
AAGDSSH
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaccccggtccgccgcgagtcacgacggtcggccgccccgtcgaactcgccccg
agagccccggaacgagacgcaacgtaccgctggcgcgtgctcgacgcgcccgaagagagc
gccgtcgcggtcggctccgggccggtcgcccacctcgcccccgacgttcccggcacgtac
cgtctcgaactcgacgcgcccgacggccgccacgaacagaccgttcgcgccttccccgac
gaccgccgcccggcgacgatggcggtccccgcggccgacctcgaacccgcgtcgcccgac
gaggtgtccgtcatcgggccgttcaacgaccgcctcgtcggccgcgaccgcccgcgccgc
gtcggcgacgactacgccctcgacgtggatctcccgccgggcacgcacccgttcgggttc
gccccgcacgacgacctcgcggagcaggtccgcggcgaagtcgaggttcccggaccgggc
cgcccgcgggttcgactcgacgcgcgggccgaacagggagactgcgacgaactggtcgtc
gtcgcggacgcggaatccgcgcccgacgccgaggaggcgactctctcggtcgagttcctg
ttcgacggccgcgacgcgctcgaaccgggcgactgcgaggtcgatggcgacagcctgcgc
gtcccggtcgaaacgctccgcgagttcgactcgtcggagccggtccgcgtccacgccgtc
gcggtccagacgacgaccgagtcgggcgagtcgtccgtccggcactcggttctcgacacg
ctggtcgtggagtccggaggtgcgggtgacgaaaccggttccggcctcgccggcctcgcc
gtctcgcgtcccggcgacgcgcccgagtgggcgcatcacgcgaccgtctacgaggtgttc
gtccggtcgttcgtcggcgagacgcccgacccgacgttcgacgaactcgcccggcgggtt
ccctacctcgaatcgctcggcgtcgactgcctgtggctcacgccgatactggagagccac
acgacccacggctaccacgtcaccgactacttcgagaccgcctcggacctcggcacgcgc
ggcgacttcgaggcgctcgtcgaccgctgtcacgacgccggcatccgcgtcgtcttcgac
ctcgtcatcaaccacacgtcgcgggaccacccggccttccagttccactcgaccggcgtc
cccggctacgaggaccactacgcccgcgtccccgagcgcgaggacccctccgaggtcgac
tggggcggccccggcgcggcggaacactacttcaactggacgcgcatcccgaacctcaac
tacgactcgcccgcggtccggtcgtggatgctcgacgtggtctccgagtgggcggcggtc
gtcgacggcttccgctgcgacgtcgcgtggggcgtcccccacggcttctggaaggaggtc
cgcgagcgggtgaaggccgacgaccccgacttcctgctcctcgacgagaccatcccgcgg
gaccccgcgtaccacgagaccgagttcgacgcccactacgacacgacgctgtacgggtcg
ctccgcgacgtcggcgcgggcgagaaaccggcgacggccgtcctcgacgcggtcgcagac
gcccgctggcacggcttccccgacgacgccgtgcaactccggtacatcgagaaccacgac
gaggagcgctaccggagcgaagtcggtgaggacgcgctccgggcggccgcggccgcgacg
ttcacgctccccggcgcgccgatgatttactacggccaagagaccggcgtcgaagcccag
cgcgggacgatgcgctggtacgacgccgacaccgacctcgtggagttccaccggcggctc
tcccgtctccgcgacgcccacgaagtcctccgcgtcggcgacgtcgaacccgtccccgcc
agcgtcgctcccgccggaaacggcggcgtcgagtccgaccgcgtggtcgcgttcgcccgc
gacgacggcaccgaccggctcgtcgtcgtcctgaacttcgacggggagccgacgaccgtc
gaactcggcgcggaagtcgaggggaccgacctcctgacgggcgagcgagtcgacgctggc
ggcgcggccgggggcgacgggcgcgctcgcgtcaccgtcgccgacgcggccgtgctccga
gccgccggcgattcgagccattaa
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