Haloferax gibbonsii: ABY42_03275
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Entry
ABY42_03275 CDS
T04025
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
hgi
Haloferax gibbonsii
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hgi03036
]
ABY42_03275
Chromosome and associated proteins [BR:
hgi03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
ABY42_03275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
Crescentin
AAA_13
DUF724
ATG16
DUF1664
MscS_porin
APG6_N
CENP-F_leu_zip
AAA_29
GAS
AAA_15
EzrA
Exonuc_VII_L
DUF4200
ERM_helical
TPR_MLP1_2
KASH_CCD
DUF4201
DUF4407
Laminin_II
WEMBL
Fib_alpha
ABC_tran_CTD
Myosin_tail_1
DUF5082
IFT57
Baculo_PEP_C
Lebercilin
DUF3450
NPV_P10
Filament
Fez1
T3SSipB
Snapin_Pallidin
ADIP
Seryl_tRNA_N
FlaC_arch
ATG14
DUF2721
COG6_N
Motif
Other DBs
NCBI-ProteinID:
AKU06811
UniProt:
A0A0K1IQS3
LinkDB
All DBs
Position
607826..611527
Genome browser
AA seq
1233 aa
AA seq
DB search
MHIKELVLDGFKSFGRPTRIPFYEDFTVVTGPNGSGKSNIIDGVLFALGLARTRGIRAEK
LTDLIYNPGHADGSDEAAKQPKEASVTVVLDNSEGTLDRSQVVNAAGTDKVGDVEEITIK
RRVKETPDNYYSYYYLNERSVNLSDIKDLLAQAGITPEGYNVVMQGDVTEIINMTPYQRR
GIIDEIAGVAEFDEKKDAAFEELEAVEERVDEADLRIEEKETRLDQLADERETALTYKGL
REEKEEYEGYLKAAELEDKRDDLSRTESRIESTEADLEDLQAELDERQGKVTRLEEDLED
LTREIERKGEDEQLRIKSEMEEIKGDISRLENAIEAAEEKRDDAEAERRKAFVDIDRKQE
QIDDLEDDIREVKVEKASVKSDIQSKRVELSEVQAEIDSVDTEFDELKSELAARKETLDE
LKDEKNDRQRAKDRLLDDARRRSNQISETRDELERARERIPELKATVSDLHSELDTAEKN
KAKIDGVIEDLQAEKAELNDELSEVTDELQTKQSEYARLEARAGKDGDNSWPRAVTTILN
AGISGVHGAVGQLGSVDGEYAKACETAAGGRLANVVVDDDGVGSSCIDHLKSRNAGRATF
LPITKMDNRSLPRKPNNPGVVDFARNLVDYDSQYESVFSYVLGSTLVVEDMETARDLMGD
YRMVTLDGDLVERSGAMTGGSGGGSRYSFSKSGEGKLERLAKEITKLEDRRRSLNDEIRD
IDDDLDDARGRASDAADRVRTIEREIEDAEEDIEDAEAEIDRLDDRLDELQSERESVDEQ
MSDLDDEIADLDDEIETVEAAIEDIETELADSEIPELTARADDIRADIDDLEDRMSTLDG
RLNEIQLEKQYAEDAVDDLHDTVEAAQNRKAEARKSISEAESKIEEREGDLEAKREAVAE
LEEELVDLKEDRTELQGDLREARSARDEKKDRVNAVESKLESMRSAAERLEWEIDELESQ
VGDYDPDEIPDHDTVESEIERLTEEMEELEPVNMLAIDEYDDVKADLESLQERRDVLVEE
RDAIADRIDQYESQKKATFMESFDAIAENFTDIFERLSNGTGHLQLENPEDPFEEGLTMK
AQPGDKPIQRLDAMSGGEKSLTALAFIFAIQRHNPAPFYALDEVDAFLDAANAERVGQMV
DDLAGDAQFVVVSHRSALLERAERAIGVTMQGDNVSAVTGIQFGGDDGPGSDGGDADGFD
GDDSGSDDDGDDADGGDGGGADADVEAEVPADD
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcaaagagctcgtccttgacggtttcaagagcttcgggcggccgactcgcatc
ccgttctacgaggatttcacggtcgttacgggcccgaacggttccggcaaatcgaacatc
atcgacggcgtcctcttcgcgctcggtctcgcccgcacccgcgggattcgcgccgagaag
ctgacggacctcatctacaatcccggccacgccgacgggagcgacgaggccgcgaaacag
cccaaggaggccagcgtcacggtcgtcctcgacaactccgaggggacgctcgaccggtcg
caggtcgtcaacgccgccggcaccgacaaggtcggcgacgtcgaggagataaccatcaag
cgccgcgtcaaggagacgccggacaactactactcgtactactacctcaacgagcgctcc
gtcaacctctcggacatcaaggacctgctcgcccaggcgggcatcacccccgagggctac
aacgtcgtcatgcagggcgacgtgaccgagataatcaacatgacgccctaccagcggcgg
ggcatcatcgacgaaatcgcgggcgtcgccgagttcgacgagaagaaagacgccgccttc
gaggagttggaggcggtcgaagagcgcgtcgacgaggcggacctccgcatcgaggaaaag
gagacgcgcctcgaccaactcgccgacgagcgcgagaccgcgctcacctacaagggactc
cgcgaggagaaagaagagtacgagggctacctgaaggccgcggagctcgaagacaagcgc
gacgacctctcgcggaccgaatcgcgcatcgagtccacggaggccgacctcgaagaccta
caggccgaactcgacgagcgacagggcaaggtcacccgtctcgaagaggacctcgaagac
ctcacccgcgaaatcgagcgcaagggcgaggacgaacagctccgcatcaagtcggagatg
gaggagataaaaggcgacatctcccggctcgaaaacgccatcgaggccgccgaggaaaag
cgcgacgacgccgaggccgagcgccggaaggcgttcgtcgacatcgaccgcaagcaagaa
cagatcgacgacctcgaagacgacatccgcgaggtcaaagtcgagaaggcgtcggtcaaa
agcgacatccagtccaagcgggtcgaactctccgaggtgcaggccgaaatcgactcggtc
gacaccgagttcgacgaactgaagtccgaactcgcggcgagaaaggagacgctcgacgag
ctcaaagacgagaagaacgaccgccagcgcgccaaggaccgcctgctcgacgacgcgcgc
cgccgctcgaaccagatctcggagacgcgggacgaactcgaacgcgcccgcgagcgcatc
cccgaactgaaggcgacggtctccgacctgcacagcgaactcgacaccgccgagaagaac
aaggcgaagatagacggcgtcatcgaggacctgcaggccgagaaggccgaactgaacgac
gaactctcggaggtcacggacgaactccagaccaagcagtccgagtacgcccgcctcgaa
gcccgcgccgggaaggacggcgacaactcctggccccgagccgtcacgaccatcctcaac
gccggcatctccggcgttcacggcgcggtcggccaactcggctccgtcgacggcgagtac
gccaaggcgtgtgagacggccgccggcggccgcctcgccaacgtcgtcgtcgacgacgac
ggcgtggggtcgtcctgtatcgaccacctgaagtcccgcaacgcgggccgcgcgacgttc
ctgcccatcacgaagatggacaaccggagcctgccgcgcaagcccaacaaccccggcgtc
gtcgacttcgcgcgcaacctcgtcgactacgacagccagtacgagtccgtcttctcgtac
gtcctcggctcgacgctcgtcgtcgaggacatggagaccgcccgcgacctgatgggcgac
taccgcatggtcaccctcgacggcgacctcgtcgagcgctccggcgcgatgaccggcggc
tccggcggcggctctcgctactccttttcgaagtccggcgagggcaaactcgaacgcctc
gcgaaggaaatcacgaagctcgaagaccgccgtcgctcgctcaacgacgagattcgggac
atcgacgacgacctcgacgacgcccgcggccgggcctccgacgccgccgaccgcgtccgg
accatcgagcgcgaaatcgaggacgccgaggaggacatcgaggacgccgaagccgaaatc
gaccgcctcgacgaccgcctcgacgaactccagtccgaacgcgagtcggtggacgaacag
atgtccgacctcgacgacgaaatcgccgacctcgacgacgaaatcgagacggtcgaggcc
gcaatcgaggacatcgagaccgaactcgcggactccgagattccggaactcaccgcccgc
gccgacgacattcgcgcggacatcgacgacctcgaagaccggatgtccacgctcgacggc
cggctcaacgagattcaactcgaaaagcagtacgcggaagacgcggtcgacgacctccac
gacacggtcgaggccgcccagaaccgcaaagctgaggcccggaagtccatctccgaggcg
gagtcgaaaatcgaggagcgcgagggcgacctcgaagcaaagcgcgaggcggtcgccgaa
ctcgaggaggaactggtcgacctcaaggaggaccgcacggagctccagggcgacctccgg
gaggctcggagcgcccgcgacgagaagaaagaccgggtgaacgcggtcgaatcgaagctc
gaaagcatgcgctcggccgcggagcgcctcgagtgggaaatcgacgaactcgagtcgcag
gtcggcgactacgaccccgacgagattcccgaccacgacaccgtcgagtccgaaatcgag
cggctcacggaggagatggaggaactcgaaccggtcaacatgctcgccatcgacgagtac
gacgacgtgaaggccgacctcgaatccctccaggagcgccgcgacgtgctggtcgaagag
cgcgacgccatcgccgaccgcatcgaccagtacgagtcccagaagaaggcgacgttcatg
gagtcgttcgacgccatcgccgagaacttcaccgacatcttcgagcgcctgtcgaacggg
acgggccacctccagttggagaacccggaagacccattcgaggagggcctgacgatgaag
gcccagccgggcgacaagcccatccagcgcctcgacgccatgtccggcggcgagaagtcg
ctgacggcgctcgcgttcatcttcgcaatccagcggcacaaccccgcgccgttctacgcg
ctcgacgaggtggacgccttcctcgacgccgcgaacgccgagcgcgtcggccagatggtc
gacgacctcgcgggcgacgcccagttcgtcgtcgtctcgcaccgctccgcgctgctcgaa
cgcgccgagcgcgccatcggcgtgacgatgcagggcgacaacgtcagcgccgtcacgggt
atccagttcggcggcgacgacggccccggaagcgatggaggcgatgcggacggattcgac
ggcgacgacagcggaagcgacgacgacggcgacgatgccgacggtggtgacggcggcgga
gccgacgcggacgtggaagcggaggttccggcggatgactga
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