Haloferax gibbonsii: ABY42_03485
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Entry
ABY42_03485 CDS
T04025
Name
(GenBank) transcription initiation factor IIB 3
KO
K03124
transcription initiation factor TFIIB
Organism
hgi
Haloferax gibbonsii
Pathway
hgi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ABY42_03485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hgi03021
]
ABY42_03485
Transcription machinery [BR:
hgi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
ABY42_03485
Prokaryotic type
Archaeal type
TFB
ABY42_03485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cyclin_C
Cyclin_N
Motif
Other DBs
NCBI-ProteinID:
AKU06847
UniProt:
A0A0K1IQM1
LinkDB
All DBs
Position
646416..647396
Genome browser
AA seq
326 aa
AA seq
DB search
MKRPTRQREREHDRTRWGDESQDDETSEEELDLDDLDPEEVVRTGDGELIHEETGIIIEE
ERIDPGPEWRAFNHSERQSKSRVGAPTTQTMHDKGLTTTIDWKDKDAYGRSISSKKRSQM
HRLRKWQERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALSEDLIRGR
SIEGVATSALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQELGLEMRPVDPKKY
VPRFSSELDLSKEVQSKANEIIETTAEQGLLSGKSPTGFAAAAIYAASLLCNEKKTQREV
AEVAQVTEVTIRNRYQEQIEAMGIHT
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggcctacccgccagcgggagcgtgagcacgaccggactcgatggggagacgag
tcacaggacgacgagacatcagaagaggagttggacctcgacgacctcgaccccgaggag
gtcgttcggaccggcgacggcgagttgattcacgaagagaccggcatcatcatcgaagaa
gagcgcatcgaccccggcccggagtggcgggcgttcaaccactccgagcggcagtcgaag
tctcgcgtgggcgcgccgaccacgcagacgatgcacgacaaggggctgacgacgaccatc
gactggaaggacaaagacgcctacggccgctctatctcctcgaagaagcggtcgcagatg
caccgcctgcgcaagtggcaagagcgcatccgcacgaaggacgccggcgagcgtaacctc
cagttcgcgctcagcgaaatcgaccgcatggcctcggcgctcggcgtcccgcggtcggtc
cgcgaggtcgcctcggtcatctaccgccgcgcgctcagcgaggatctgattcgggggcgc
tccatcgagggcgtcgccacctcggcgctctacgccgcctgtcgcaaggagggcattcct
cgttccctcgaagagatttccgaggtgtctcgcgtcgagcgcaaggaaatcggtcgcacg
taccgctacatctcccaggagctcggcttggagatgcggccggtggacccgaagaagtac
gtcccgcggttttcgtccgaactcgacctctcgaaggaggtccagtcgaaggcgaacgag
attatcgagacgaccgcggaacaggggcttctctccgggaagtcgccgaccggcttcgcg
gccgccgcaatctacgccgcgtcgcttctctgcaacgagaagaagacccagcgcgaggtc
gccgaggtcgcgcaggtgacggaagtcaccatccggaaccgctaccaagagcagatcgaa
gcgatgggcatccacacctga
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