Haloferax gibbonsii: ABY42_03795
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Entry
ABY42_03795 CDS
T04025
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
hgi
Haloferax gibbonsii
Pathway
hgi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ABY42_03795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hgi03021
]
ABY42_03795
Transcription machinery [BR:
hgi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
ABY42_03795
Prokaryotic type
Archaeal type
TFB
ABY42_03795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Anti-TRAP
Zn_ribbon_tTFIIB
Zn_ribbon_LysW
HTH_Tnp_ISL3
Cas12f1-like_TNB
Lar_restr_allev
Zn_ribbon_3
DNA_ligase_ZBD
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
AKU06906
UniProt:
A0A0K1IR19
LinkDB
All DBs
Position
complement(707909..708916)
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AA seq
335 aa
AA seq
DB search
MSERIWTRNPGAQEQERNTQNGRQEAETEQEDTKGDTLQCPECGGHVVTDDEHGETVCND
CGLVVTADSVDRGPEWRAFDAREKDEKSRVGAPTTNTMHDKGLSTNIDWRDRDAYGNSLG
ARQRQKMQRLRKWNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALD
DDLLPGRSIEGVATSCTYAAARMAGVPRSLDEIAEVSRVEKSEVARTYRYIARELSLEVK
PADPEQYVPRFASELGLSDESKMRARQLLKNAKEKGVHSGKSPVGLAAAAVYAAALLTNE
KTTQAAVSDVADISEVTIRNRYHELLEAEENLGLV
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacgaatctggacccgaaaccccggcgcacaggagcaggaacgaaacacgcag
aacggccgacaggaggccgaaaccgaacaggaagacacgaagggcgacacgctgcagtgt
cccgagtgcggcggtcacgtcgtcaccgacgacgaacacggcgagaccgtctgtaacgac
tgcggactcgtcgtgaccgcggactccgtcgaccgcggccccgagtggcgcgcgttcgac
gcccgcgagaaagacgagaagtcccgcgtcggcgcgccgacgaccaacacgatgcacgac
aagggcctgtcgacgaacatcgactggcgcgaccgcgacgcgtacggaaactccctcggc
gcgcgccagcgccagaagatgcagcggctccgcaagtggaacgagcggttccgcacccgc
gactccaaagagcgcaacctgaagcaggcgctcggcgaaatcgaccgcatggcctccgcg
ctcggcctgcccgagaacgtccgcgagacggcgtcggtcatctaccgccgcgcgctcgac
gacgacctgctgcccggccgctccatcgagggcgtcgccacgtcgtgtacctacgccgcc
gcccgcatggccggcgtcccgcgctcgctcgacgaaatcgcggaggtctcgcgcgtcgag
aagagcgaggtcgcccgcacctaccgctacatcgcccgcgaactctcgctggaggtcaag
cccgccgaccccgaacagtacgtcccgcggttcgccagcgaactcggcctctccgacgag
tcgaagatgcgcgcgcgccaactcctgaagaacgccaaggagaagggcgtccactcgggt
aagtcgccggtcggcctcgccgccgccgccgtctacgccgccgccctcctcaccaacgag
aagaccacgcaggccgccgtcagcgacgtggccgacatctccgaggtcaccatccgcaac
cgctaccacgaactcctcgaagccgaggagaacctcggcctcgtctga
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