Haloferax gibbonsii: ABY42_03900
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Entry
ABY42_03900 CDS
T04025
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K07730
putative transcriptional regulator
Organism
hgi
Haloferax gibbonsii
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hgi03000
]
ABY42_03900
Transcription factors [BR:
hgi03000
]
Prokaryotic type
Helix-turn-helix
Other families
ABY42_03900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7839
MarR_2
HTH_24
MarR
HVO_A0261_N
HTH_Crp_2
HTH_20
HTH_IclR
HTH_5
HTH_11
HTH_45
HTH_27
TrmB
SMC_ScpB
DUF7343
Rrf2
HTH_13
HVO_A0114
GntR
AbiEi_4
Fe_dep_repress
Mnd1
HTH_Cmi2_C
WHD_RNase_R
HTH_23
Rio2_N
HTH_28
Mrr_N
DUF7342
LexA_DNA_bind
HTH_3
NirdL-like_HTH
HTH_AsnC-type
YdaS_toxin
Dimerisation
EutK_C
NMD3
HTH_69
WHD_MCM
wHTH-PRTase_assc
DUF4364
FaeA
Motif
Other DBs
NCBI-ProteinID:
AKU06927
UniProt:
A0A0K1IQV0
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All DBs
Position
complement(730243..731022)
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AA seq
259 aa
AA seq
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MSGALEDKRTATRFRILAEIADRQPAVSQGEIAEAVGVTSQAVSEYIRDLVEDGLVEKQG
RSRYRVTKEGVDWLFQEARALQRFAEHVTDDVLESVNEDAAIVTDDVAAGDTVTLSLRDG
LLHATPGDDGPAIGVATTDAEAGDAASVTGFEGVIEMEPGSVRVLQVPPARLAESDAVDA
DALAAACDEADIVVAAGVEAVVACRHASVEVKTWFAPGEVAADAAARGLDAAVVASTDTA
GRVTDALRDAGVLFEVTEP
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgcactggaggacaagcgcaccgcgacccgctttcgcatcctcgccgagata
gccgaccggcagccggcggtgagtcagggcgaaatcgccgaggcggtcggggtgacgagt
caggcggtctccgagtacatccgcgacctcgtcgaagacgggctcgtcgaaaagcagggc
cggtcgcgctaccgcgtgacgaaagagggcgtcgactggctgtttcaggaggcgcgcgcc
ctccagcggttcgccgaacacgtcaccgacgacgtgctggagagcgtcaacgaggacgcc
gcaatcgtcaccgacgacgtggcggccggcgacacggtgaccctgtcgctccgcgacggc
ctgctacacgccacgcccggcgacgacgggccggccatcggcgtcgccaccaccgacgcc
gaggcgggcgacgcggccagcgtcaccggcttcgagggcgtcatcgagatggaacccggt
tcggtccgcgtgctgcaggtgccgcccgcgcggctcgccgagtccgacgcggtcgacgcg
gacgcgctcgcggcggcgtgcgacgaggccgacatcgtcgtcgccgcgggcgtcgaggcc
gtcgtcgcctgccgacacgcgtcggtcgaggtcaagacgtggttcgcgccgggcgaggtc
gccgccgacgccgcggcccgcggactcgacgccgcggtcgtcgccagcacggacaccgcc
gggcgcgtgaccgacgcgctccgcgacgcgggcgtgctgttcgaagtgacggagccgtag
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