Haloferax gibbonsii: ABY42_05350
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Entry
ABY42_05350 CDS
T04025
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hgi
Haloferax gibbonsii
Pathway
hgi00300
Lysine biosynthesis
hgi00470
D-Amino acid metabolism
hgi01100
Metabolic pathways
hgi01110
Biosynthesis of secondary metabolites
hgi01120
Microbial metabolism in diverse environments
hgi01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ABY42_05350
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABY42_05350
Enzymes [BR:
hgi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
ABY42_05350
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
EccE
Motif
Other DBs
NCBI-ProteinID:
AKU07195
UniProt:
A0A0K1IS97
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All DBs
Position
complement(1015564..1016811)
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AA seq
415 aa
AA seq
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MSGGGPAVRRLSDWDREHLLSLADEFGSPLYVTDLRRVRENCHRLREAFPEAHVSYAVKA
HAGRAVLETVREAGVDAECASAGEVERALDAGFPGERVRYTAVNPPDADLDHVVSRWESN
PEMTVTVGAADTIDRLRERGFDGRLCLRANPGVGAGHHEKVTTGGHAKFGIPIDRVPDIA
ADARDEFDLVGVHAHAGSGISGDDLSAHRELVRRMGDLAREVGDLEFVDVGGGFGVPYRE
DEPPLDLDAVADATREALGEVDARLAIEPGRYVVADAGVLLSRVNTVKEAPETTVVGIDA
GMTTLLRPAMYDAYHAISNLSRPDADPVSTIVAGPVCETSDVFADGRELPEPERGDCLAL
GNAGAYGYEMASTYNSRPRPPEVVLDADGPRLARRRETLDDVTALERTASEHIPN
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcggcgggccggccgtccggcggctctcggactgggaccgcgagcacctgctg
tcgctcgccgacgagttcggctcgccgctgtacgtgaccgacctccgtcgcgtccgcgag
aactgtcaccgactccgcgaggcgttccccgaggcgcacgtcagctacgccgtcaaggcc
cacgccggtcgcgcggtgctcgaaaccgtccgcgaggccggcgtcgacgccgagtgcgcc
tccgcgggcgaagtcgagcgcgccctcgacgccggcttccccggcgagcgcgtccgctac
acggcggtcaacccgccggacgccgacctcgaccacgtcgtctcgcggtgggagtcgaac
cccgagatgaccgtcacggtcggcgcggcggacactatcgaccgcctgcgcgagcgcggc
ttcgacggtcggctctgcctccgggcgaaccccggcgtcggcgcgggccaccacgagaag
gtcacgaccggcgggcacgcgaagttcggcatccccatcgaccgcgtccccgacatcgcc
gccgacgcgcgcgacgagttcgacctcgtcggcgtccacgcccacgcgggaagcggcatc
tccggcgacgacctctcggcgcaccgcgagttggtccgccggatgggcgacctcgcccga
gaggtcggcgacctcgaattcgtcgacgtgggcggcggcttcggcgtcccctaccgcgag
gacgaaccgccgctcgacctcgacgccgtcgccgacgcgacccgcgaggcgctcggcgag
gtggacgcgcgactcgcaatcgaacccggccgctacgtcgtcgccgacgccggcgtcctc
ctctcgcgggtcaacaccgtgaaggaggcccccgagacgaccgtcgtcggcatcgacgct
ggtatgacgaccctgctccgaccggcgatgtacgacgcgtaccacgcgatttcaaacctc
tctcggcccgacgccgacccggtttcgaccatcgtcgcgggccccgtctgcgagacgagc
gacgtgttcgccgacggccgcgaactccccgaacccgagcgcggcgactgtctcgcgctc
ggcaacgcgggggcgtacggctacgagatggcgagcacctacaactctcgtccgcgcccc
ccggaagtcgtcctcgacgccgacggcccccgactggcccgccggcgcgagaccctcgac
gacgtcaccgcactcgaacgaaccgcatccgagcacatccccaactga
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