Haloferax gibbonsii: ABY42_06790
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Entry
ABY42_06790 CDS
T04025
Name
(GenBank) DNA-directed RNA polymerase subunit M
KO
K03057
transcription factor S
Organism
hgi
Haloferax gibbonsii
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hgi03021
]
ABY42_06790
Transcription machinery [BR:
hgi03021
]
Prokaryotic type
Archaeal type
Basal transcription factors
TFS
ABY42_06790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_TFIIS
Zn_ribbon_RPB9
Zn_ribbon_3
Cas12f1-like_TNB
Zf_2nd_IFT121
Zn_ribbon_IS1595
Zn_ribbon_recom
DZR
Zn_ribbon_RRN7
PknG_rubred
Zn_Ribbon_1
DNA_ligase_ZBD
DUF5795
Zn_ribbon_8
RUBY_RBDX
DUF5817
Motif
Other DBs
NCBI-ProteinID:
AKU07460
UniProt:
A0A0K1IT19
LinkDB
All DBs
Position
complement(1279172..1279492)
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AA seq
106 aa
AA seq
DB search
MEFCDDCGSLMTPQDGVWVCPNGHEKARDSEKEKSMVTTEGQESSEVVDMSDVDNADIGP
TTKTICPKCGHDVARYEMKQIRSADESETRFFTCVECDHKWREDDH
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atggagttttgcgacgactgcgggtccctgatgacgccgcaagacggcgtctgggtctgt
ccgaacggccacgagaaagcgcgcgacagcgaaaaggagaagtcgatggtcacgaccgag
ggccaagagtccagcgaggtcgtcgacatgtccgacgtggacaacgccgacatcggcccg
acgacgaagaccatctgcccgaagtgcggccacgacgtggcgcgctacgagatgaagcag
atccgctcggccgacgagtccgagacgcgtttcttcacctgcgtcgagtgcgaccacaag
tggcgcgaagacgaccactga
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