Haloferax gibbonsii: ABY42_08445
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Entry
ABY42_08445 CDS
T04025
Name
(GenBank) transcription factor
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hgi
Haloferax gibbonsii
Pathway
hgi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ABY42_08445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hgi03000
]
ABY42_08445
03021 Transcription machinery [BR:
hgi03021
]
ABY42_08445
Transcription factors [BR:
hgi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
ABY42_08445
Transcription machinery [BR:
hgi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
ABY42_08445
RNA polymerase III system
TFIIIB
ABY42_08445
RNA polymerase I system
SL1/TIF-1B
ABY42_08445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-ProteinID:
AKU07777
UniProt:
A0A0K1ITB7
LinkDB
All DBs
Position
complement(1617075..1617635)
Genome browser
AA seq
186 aa
AA seq
DB search
MSGPADSIEIQNVVASTGIGQELDLEALADDLPGADFNPDNFPGLVYRTQDPKAAALIFR
SGKIVCTGAKSIDDVHDALGIIFDKLRELKIPVDDEPEITVQNIVSSADLGHNLNLNALA
IGLGLEDVEYEPEQFPGLVYRMDEPKVVILLFGSGKIVITGGKRTDDAETAVEEIVERID
ALGLLG
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggccggcagactccatcgagattcagaacgtagtcgcatcgaccgggatcggt
caggagctcgacctcgaagccctcgccgacgacctccccggtgcagatttcaacccggac
aacttcccgggcctcgtctatcgcacccaggacccgaaagccgctgcgctcatcttccgc
tcggggaagatcgtgtgcacgggcgcaaagagtatcgacgacgtgcacgacgcactcgga
atcatcttcgacaagctccgcgagctgaagattcccgtcgatgacgagccagagataacc
gtccagaacatcgtctccagcgcggacctcggacacaacttgaacctgaacgcgctggct
atcggactcggtctcgaagacgtcgagtacgagcccgagcagttccccggcctcgtctat
cggatggacgagccgaaggttgtcatcctgcttttcggttccgggaaaatcgtcattacc
ggcggaaagcggaccgacgacgcggagaccgcggtcgaagagatcgtcgagcgcatcgac
gcgctcggactgctcggatag
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