Haloferax gibbonsii: ABY42_08955
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Entry
ABY42_08955 CDS
T04025
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hgi
Haloferax gibbonsii
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hgi03016
]
ABY42_08955
Enzymes [BR:
hgi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
ABY42_08955
Transfer RNA biogenesis [BR:
hgi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABY42_08955
Prokaryotic type
ABY42_08955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AKU07865
UniProt:
A0A0K1IU72
LinkDB
All DBs
Position
complement(1719527..1720420)
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AA seq
297 aa
AA seq
DB search
MRAFRVAYDGRPYHGFQRQPDVPTVEDALFDACRALGVCDDDEEPTDYAAAGRTDAGVSA
LAQTVAFECPDWCTPRALNSELPGTVRAWAAADAPDDFHARHRPTRREYVYDLHAPSDGF
DDDRARDAFDACRGEHDFHNLTPDAHGTVRAIDGDLTRDGDFLLVRVESGGFARELVRRL
VSLVRAVGSGAAPPSKVDDVLGPDHLAGPEGVPAAPPTPLLLTAVDYPNVEFDVDSMAAE
STAAAFGEQALADRIGWRVGSRIRDGVERAGDLGDGNADATDDDGGVGGSRGGTRSQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccttccgcgtcgcctacgacggacgcccgtaccacgggttccagcgacagccg
gacgtgccgaccgtcgaggacgccctcttcgacgcctgccgcgcgctcggcgtctgcgac
gacgacgaggagccaaccgactacgccgccgccgggcggaccgacgcgggcgtctccgcg
ctcgcccagaccgtcgcattcgagtgtcccgactggtgtacgccgcgggcgctgaactcg
gagctaccggggacggtccgagcgtgggccgccgccgacgcccccgacgacttccacgcc
cggcaccgaccgacccgccgcgagtacgtctacgacctccacgccccgagcgacggattc
gacgacgaccgggcgcgagacgcgttcgacgcctgccgcggcgaacacgacttccacaac
ctcacccccgacgcccacgggacggtccgggccatcgacggcgacctgacccgcgacggc
gacttcctcctcgtccgcgtcgagtccggcggcttcgcccgcgaactcgtccgcagactc
gtctcgctcgtccgcgccgtggggtcgggcgcggccccgccgtcgaaggtggacgacgtg
ctcggtcccgaccacctcgctggccccgagggcgtcccggccgcgccgccgacccccctg
cttctcacggcggtcgactacccgaacgtcgagttcgacgtggactcgatggccgccgag
agcaccgccgcggctttcggcgagcaggccctcgcggaccgcatcggctggcgcgtcggc
tcgcgcatccgcgacggggtcgagcgggcgggcgacctcggtgacgggaacgccgacgcc
accgacgacgacggcggcgtcggggggagccgcgggggcacaaggagtcaatag
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