Haloferax gibbonsii: ABY42_09295
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Entry
ABY42_09295 CDS
T04025
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hgi
Haloferax gibbonsii
Pathway
hgi00061
Fatty acid biosynthesis
hgi00071
Fatty acid degradation
hgi01100
Metabolic pathways
hgi01212
Fatty acid metabolism
hgi02024
Quorum sensing
hgi04146
Peroxisome
Module
hgi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ABY42_09295
00071 Fatty acid degradation
ABY42_09295
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ABY42_09295
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABY42_09295
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hgi01004
]
ABY42_09295
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hgi04147
]
ABY42_09295
Enzymes [BR:
hgi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ABY42_09295
Lipid biosynthesis proteins [BR:
hgi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ABY42_09295
Exosome [BR:
hgi04147
]
Exosomal proteins
Exosomal proteins of breast milk
ABY42_09295
Exosomal proteins of breast cancer cells
ABY42_09295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AKU07925
UniProt:
A0A0K1IUD1
LinkDB
All DBs
Position
complement(1780730..1782730)
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AA seq
666 aa
AA seq
DB search
MDWRDAEAAFDDPVIERTTLPRMFESSASRNATRVAQRYKGGVYRRSLVAEGVVPAAPDG
DYADLTYEEMRGIVRRLAAGFRDLGIETGDRVGILSHTRMEWAQTDFAVLGAGGVVTTVY
TSSSERQVQYLLSDPGANAVVVENQELLERVLAVEDELDLRFIVVVDEYEGHEDRDDVLT
LGELYRRGEEVYDEAAYESWLDEREPEDLASLIYTSGTTGQPKGVQLTHWNFRSNVNESY
RRFGPRPDKGDTPVIGPDSVALSFLPLAHVFERMAGHFMMFAAGAAVAYAESPDTLREDF
QLVRPTTGTSVPRVYEKLYDAIRAQASESPAKKRIFEWAVGVGQAYHTTDAPGYLLTAKH
RLADRLVFGQVREALGDNLDFFISGGGSLSAELCALYHAMGLPIYEGYGLTETSPVISVN
PPEEPKIGTIGYPLRNVETKLDTTVVGDQLGDAGGEVGELLVRGSSVTEGYWNNPEETEA
AFVEDDEGERWFRTGDVVELRPDGYITFRERAKQILVLSTGKNVAPGPIEDAFASSPVVE
QCMVLGDGRKFVSALIVPSFDGLRKWADEEGIDLPDEPKAICRDDRVYERIEAEVEAANE
NFESYERIKQFRVVPEEFTEGNDLMTPTMKKKRRNILDRYADEVSLIYDEDRRSEERRGG
GRAATQ
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggactggcgggacgcggaggcggcgttcgacgaccctgtcatcgagcggacgaccctc
ccacggatgttcgaatcgagcgcgtcgcggaacgccacgcgagtcgcacagcggtacaaa
ggcggcgtctaccgccggtcgctggtcgccgagggcgtcgttccggcggcccccgacggc
gactacgccgacctgacctacgaggagatgcggggcatcgtccgtcgcctcgcggcgggg
ttccgcgacctcggcatcgagaccggcgaccgggtcggcatcctctcgcacacgcgcatg
gagtgggcccagaccgacttcgccgtcctcggcgcgggcggcgtcgtcaccacggtctac
acctcgtcgtcggagcggcaggtgcagtacctgctttccgaccccggcgcgaacgccgtc
gtcgtcgagaatcaggagttactggagcgcgtgctcgccgtcgaggacgaactcgacctg
cgcttcatcgtcgtcgtcgacgagtacgagggccacgaggaccgcgacgacgtgctgacg
ctcggcgaactctaccgccgcggcgaggaagtgtacgacgaggcggcctacgagtcgtgg
ctggacgagcgcgagcccgaggacctcgccagcctcatctacacctcggggacgaccggc
cagccgaagggcgtccaactcacccactggaacttccggtcgaacgtcaacgagagctac
cggcggttcggtccccgcccggacaaaggcgacacgccggtcatcggccccgactcggtc
gcgctgtcgttcctgccgctcgcgcacgtcttcgagcgcatggccggccacttcatgatg
ttcgcggcgggcgcggccgtcgcctacgccgaaagtcccgacacgctccgcgaggacttc
cagctcgtccggccgaccacggggacgagcgtcccccgcgtgtacgagaagctctacgac
gcgattcgggcgcaagccagcgagtcgccggcgaaaaagcgcatcttcgagtgggccgtc
ggcgtcgggcaggcgtaccacacgaccgacgcgccgggctacctgctcaccgcgaaacac
cgcctcgccgaccggctcgtgttcgggcaggtgcgcgaggcgctcggcgacaacctcgac
ttcttcatcagcggcggcgggagcctctcggccgagctgtgcgcgctctaccacgcgatg
ggcctcccgatttacgagggctacggcctcaccgaaacgtcgcccgtcatctcggtcaac
ccccccgaggaaccgaaaatcggaactatcggctacccgcttcggaacgtcgagacgaaa
ctcgacacgaccgtcgtcggcgaccaactcggagacgcgggcggcgaggtgggcgaactg
ctcgtccgcgggtcgagcgtcaccgagggctactggaacaaccccgaagagaccgaggcg
gcgttcgtcgaggacgacgagggcgagcgctggttccgcaccggcgacgtggtcgaactc
cggcccgacggctacatcaccttccgcgagcgcgccaagcagattctcgtcctctcgacg
ggcaagaacgtcgcgcccggccccatcgaggacgcgttcgcctcctcgccggtggtcgaa
cagtgcatggtcctcggcgacggccgcaagttcgtctcggcgctcatcgtgcccagtttc
gacgggctgcggaagtgggccgacgaggagggcatcgacctccccgacgagccgaaagcc
atctgccgcgacgaccgggtgtacgagcgcatcgaagccgaggttgaggcggccaacgag
aacttcgagtcctacgagcgaatcaagcagttccgcgtcgttcccgaggagttcacggag
ggtaacgacctgatgacgccgacgatgaaaaagaagcgccggaacatcctcgaccgctac
gccgacgaggtgtctctcatctacgacgaggaccgccggagcgaagagcggcggggtggc
gggcgggccgcgactcagtga
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